Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_P15
         (916 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0186 + 1491202-1491210,1491401-1491476,1491573-1492075           31   1.3  
08_02_1334 - 26224546-26225337                                         30   2.2  
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999...    29   3.9  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.2  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    29   6.8  
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148...    28   9.0  

>03_01_0186 + 1491202-1491210,1491401-1491476,1491573-1492075
          Length = 195

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
 Frame = +3

Query: 297 KKPRXXKKXXXGGAPXKKKXXGKKXXLXPPPL-VXGEKTPPXFFXKXGXXXGXXPPPPP 470
           KK    KK     A  K++  G+K      P+ +   + PP +    G      PPPPP
Sbjct: 108 KKEGDGKKGEAAAAAKKEEGGGEKKVAAVAPMPMPMHQLPPPYMFNAGYMNQYRPPPPP 166


>08_02_1334 - 26224546-26225337
          Length = 263

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -1

Query: 844 GGGGGGGXXXXXXXXXXXXXXXXTPPPPPP 755
           GGGG GG                TPPPPPP
Sbjct: 99  GGGGEGGDPLVRRAVSLPAPVTATPPPPPP 128


>12_02_0800 +
           23299674-23299678,23299714-23299791,23299876-23299920,
           23300052-23300415,23300493-23300574,23300793-23300873,
           23300974-23302106,23302202-23302350,23302426-23302516,
           23303628-23305940
          Length = 1446

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -2

Query: 252 PLXPPKGXYIFLKPPGGGXXPXGTPGGGXXXGP 154
           P  PP G +     PGG   P G PGGG    P
Sbjct: 281 PGHPPDGMWHRGAAPGGPYRPLGPPGGGFPVEP 313


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 381 PPPLVXGEK--TPPXFFXKXGXXXGXXPPPPP 470
           PPPL+ G+K   PP    +     G  PPPPP
Sbjct: 752 PPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPP 783


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
 Frame = +3

Query: 381 PPPLVXGEKTPPXFFXKXGXXXG---XXPPPPP 470
           PPP      TPP F    G   G     PPPPP
Sbjct: 506 PPPFPSAPNTPPGFQGLAGPFYGPPYPAPPPPP 538


>02_01_0003 +
           13079-13610,14005-14312,14364-14549,14620-14707,
           14807-14887,14980-15044,15357-15497,15578-15694,
           15995-16237,16326-16383,18127-18224
          Length = 638

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = -2

Query: 210 PGGGXXPXGTPGGGXXXGPXXQKILKXXVXXGAPVGGFLPGG 85
           PGGG  P G PGGG   G          +  G P GG +PGG
Sbjct: 537 PGGGF-PGGMPGGGFPGGMPGGG-FPGGMPGGFP-GGAMPGG 575


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,494,579
Number of Sequences: 37544
Number of extensions: 912666
Number of successful extensions: 29236
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12509
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)