Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_P12
(901 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 75 1e-14
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 52 1e-07
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 29 1.2
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 28 1.6
SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|ch... 27 2.7
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 27 4.8
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 26 8.4
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 75.4 bits (177), Expect = 1e-14
Identities = 65/255 (25%), Positives = 101/255 (39%), Gaps = 10/255 (3%)
Frame = +2
Query: 149 WQKVYNPTGPQPRPRHGHRAVAIKD---LMIVFGG--GNEGIVHELHVFNTTTNQWFVPV 313
W K+ PR+ H + + + +FGG + ++L V N T+Q+
Sbjct: 66 WSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIFGGVASDSQPKNDLWVLNLATSQFTSLR 125
Query: 314 TKGEVPPGCAAYGFVVDGTRLLVFGGMVEY---GKYSNDLYELQASRWEWXXXXXXXXXX 484
+ GE P + ++ G +VFGG+ + + N LY L S W
Sbjct: 126 SLGETPSPRLGHASILIGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVW----QKANAS 181
Query: 485 XXXXXXXXGHSFTLLNGKVYLFGGLANESDDPKNNIPRYLNDLYILGLYP-NSSMTVWDI 661
GH+ + L K+ LFGG + Y NDL L N+S + W++
Sbjct: 182 GARPSGRYGHTISCLGSKICLFGG---------RLLDYYFNDLVCFDLNNLNTSDSRWEL 232
Query: 662 PLTYGQSPPPRESHSGVAYTDXNTGKSSLIIYGGMSGSR-LGDLWILDVDTMSWSRPEVG 838
PP R H ++D L I+GG G+ DLW +WS+ E
Sbjct: 233 ASVVNDPPPARAGHVAFTFSD------KLYIFGGTDGANFFNDLWCYHPKQSAWSKVETF 286
Query: 839 GPPPLPXSLHTATVI 883
G P P + H A+V+
Sbjct: 287 GVAPNPRAGHAASVV 301
Score = 63.7 bits (148), Expect = 3e-11
Identities = 69/253 (27%), Positives = 108/253 (42%), Gaps = 15/253 (5%)
Frame = +2
Query: 173 GPQPRPRHGHRAVAIKDLMIVFGG-GNEGIV----HELHVFNTTTNQWFVPVTKGEVPPG 337
G P PR GH ++ I + IVFGG N + + L++ NT++ W G P G
Sbjct: 128 GETPSPRLGHASILIGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANASGARPSG 187
Query: 338 CAAYGFVVDGTRLLVFGG-MVEYGKYSNDL--YEL-----QASRWEWXXXXXXXXXXXXX 493
+ G+++ +FGG +++Y Y NDL ++L SRWE
Sbjct: 188 RYGHTISCLGSKICLFGGRLLDY--YFNDLVCFDLNNLNTSDSRWE------LASVVNDP 239
Query: 494 XXXXXGHSFTLLNGKVYLFGGLANESDDPKNNIPRYLNDLYILGLYPNSSMTVWDIPLTY 673
GH + K+Y+FGG D N + NDL+ +P S W T+
Sbjct: 240 PPARAGHVAFTFSDKLYIFGG-----TDGAN----FFNDLWC--YHPKQS--AWSKVETF 286
Query: 674 GQSPPPRESHSGVAYTDXNTGKSSLIIYGGMS--GSRLGDLWILDVDTMSWSRPEVGGPP 847
G +P PR H+ + + L ++GG + G+ L DL+ + + W +
Sbjct: 287 GVAPNPRAGHAA------SVVEGILYVFGGRASDGTFLNDLYAFRLSSKHWYKLSDLPFT 340
Query: 848 PLPXSLHTATVIG 886
P P S HT + G
Sbjct: 341 PSPRSSHTLSCSG 353
Score = 49.2 bits (112), Expect = 8e-07
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +2
Query: 149 WQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGG-GNEG-IVHELHVFNTTTNQWFVPVTKG 322
W KV G P PR GH A ++ ++ VFGG ++G +++L+ F ++ W+
Sbjct: 280 WSKV-ETFGVAPNPRAGHAASVVEGILYVFGGRASDGTFLNDLYAFRLSSKHWYKLSDLP 338
Query: 323 EVPPGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLYELQASRW 448
P +++ G L++ GG G +++Y L SR+
Sbjct: 339 FTPSPRSSHTLSCSGLTLVLIGGKQGKGASDSNVYMLDTSRF 380
Score = 47.6 bits (108), Expect = 2e-06
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +2
Query: 146 KWQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGGGN-EGIVHELHVFNTTTNQWFVPVTKG 322
+W+ P P R GH A D + +FGG + ++L ++ + W T G
Sbjct: 229 RWELASVVNDPPPA-RAGHVAFTFSDKLYIFGGTDGANFFNDLWCYHPKQSAWSKVETFG 287
Query: 323 EVP-PGCAAYGFVVDGTRLLVFGGMVEYGKYSNDLYELQASRWEW 454
P P VV+G L VFGG G + NDLY + S W
Sbjct: 288 VAPNPRAGHAASVVEGI-LYVFGGRASDGTFLNDLYAFRLSSKHW 331
Score = 34.7 bits (76), Expect = 0.018
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 689 PRESHSGVAYTDXNTGKSSLIIYGGMSGSRL--GDLWILDVDTMSWSRPEVGGPPPLPXS 862
PR SH+ Y + G + I+GG++ DLW+L++ T ++ G P P
Sbjct: 79 PRYSHASHLYAE---GGQEIYIFGGVASDSQPKNDLWVLNLATSQFTSLRSLGETPSPRL 135
Query: 863 LHTATVIGH 889
H + +IG+
Sbjct: 136 GHASILIGN 144
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 52.0 bits (119), Expect = 1e-07
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 653 WDIPLTYGQSPPPRESHSGVAYTDXNTGKSSLIIYGGMSGSR-LGDLWILDVDTMSWSRP 829
W+ P + SPPPR +HS GK + ++GG + + L DLW+ D++T+SW+
Sbjct: 235 WETPFLHSSSPPPRSNHSVTLVQ----GK--IFVHGGHNDTGPLSDLWLFDLETLSWTEV 288
Query: 830 EVGGPPPLPXSLHTATVI 883
G P P H AT I
Sbjct: 289 RSIGRFPGPREGHQATTI 306
Score = 43.2 bits (97), Expect = 5e-05
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 22/243 (9%)
Frame = +2
Query: 191 RHGHRAVAIKDLMIVFGGGN-------EGIVHELHVFNTTTNQWFVPVTKGEVPPGCAAY 349
R GH V D + +FGG + E + L+ +N +NQW + T+ +P +
Sbjct: 113 RVGHSIVCSADTIYLFGGCDSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPSPRTGH 172
Query: 350 GFVVDGTRLLVFGGMVEYGKYSNDLYELQASRWEWXXXXXXXXXXXXXXXXXXGHSFTLL 529
++ ++L +FGG + GKY ND++ + F
Sbjct: 173 SMLLVDSKLWIFGGECQ-GKYLNDIHLFDTKGVDRRTQSELKQKANANNVEKANMEFDET 231
Query: 530 NGKVYLFGGLANESDDPKNN--IPRYLNDLYILGLY----PNSSMTVWDIPL-------T 670
+ + L + S P++N + +++ G + P S + ++D+ +
Sbjct: 232 DWS-WETPFLHSSSPPPRSNHSVTLVQGKIFVHGGHNDTGPLSDLWLFDLETLSWTEVRS 290
Query: 671 YGQSPPPRESHSGVAYTDXNTGKSSLIIYGGM--SGSRLGDLWILDVDTMSWSRPEVGGP 844
G+ P PRE H D ++ IYGG G L +LW + WS V P
Sbjct: 291 IGRFPGPREGHQATTIDD------TVYIYGGRDNKGLILNELWAFNYSQQRWSL--VSNP 342
Query: 845 PPL 853
P+
Sbjct: 343 IPI 345
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +2
Query: 143 LKWQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGG-GNEG-IVHELHVFNTTTNQW 301
L W +V + G P PR GH+A I D + ++GG N+G I++EL FN + +W
Sbjct: 283 LSWTEVRS-IGRFPGPREGHQATTIDDTVYIYGGRDNKGLILNELWAFNYSQQRW 336
Score = 33.5 bits (73), Expect = 0.042
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 146 KWQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGGGNEG-IVHELHVFNT 286
+W V + P P PR GH + + + +FGG +G ++++H+F+T
Sbjct: 155 QWNLV-STQSPLPSPRTGHSMLLVDSKLWIFGGECQGKYLNDIHLFDT 201
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 441 EACNSYKSFEYLPYSTMPPKTNRRVPSTTKP 349
EA + SF P +PP+ + VP T+KP
Sbjct: 926 EALRAVSSFRRPPRQLIPPQQSTNVPGTSKP 956
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 399 STMPPKTNRRVPSTTKP*AAHPGGTSPFVTGTNH 298
+T+PP T+ +TT P H T+ V T H
Sbjct: 94 TTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTH 127
>SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 234
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 420 SFEYLPYSTMPPKTNRRVPSTTKP*AAHPGGTSP 319
+F +PY + P +R PS+ A+ G TSP
Sbjct: 152 TFTAVPYDSCLPAPDRHTPSSASSRASETGTTSP 185
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 462 KRFHSHLEACNSYKSFEYLPYSTMPPKTNRRVPSTTKP*AAHPGGTS 322
K+ H ++ K+ + T P KT PST KP + P G S
Sbjct: 87 KKAHGKGKSSKRPKAVDRRRSITAPSKTEPSTPSTEKPEPSTPSGES 133
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 25.8 bits (54), Expect = 8.4
Identities = 19/72 (26%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Frame = +2
Query: 131 ENAVLKWQKVYNPTGPQPRPRHGHRAVAIKDLMIVFGGGNEGIVHELHVFNTTTNQ--WF 304
+ L QK Y P P + G RA + V G GIVH+ F W
Sbjct: 276 QGKALDGQK-YEPLFPYFKSTFGERAFKLYSADYVEEGSGTGIVHQAPAFGEADYDAAWA 334
Query: 305 VPVTKGEVPPGC 340
+ + P C
Sbjct: 335 AGIIDADHQPPC 346
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,434,138
Number of Sequences: 5004
Number of extensions: 70568
Number of successful extensions: 211
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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