Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_P10
(916 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 55 7e-08
11_01_0771 + 6453130-6454488 47 2e-05
01_01_1152 + 9170628-9171899 45 7e-05
11_01_0750 - 6315126-6315896,6316371-6316784 45 1e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 44 2e-04
11_02_0011 - 7337618-7338496,7338596-7338991 42 5e-04
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 42 5e-04
11_02_0012 - 7346282-7347136,7347234-7347593 42 0.001
11_01_0767 + 6438648-6438809,6439146-6440000 41 0.002
11_02_0014 - 7352619-7352918,7353173-7353418 37 0.019
05_06_0044 - 25150322-25151260 35 0.078
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 30 2.9
01_01_1013 - 8015552-8015613,8016898-8018035 29 3.9
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 28 9.0
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 55.2 bits (127), Expect = 7e-08
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +3
Query: 432 ANKIYVSDQYKLADAFSRT-ANLFRSEVDNINFSAP-KNAADIINRWADEQTQGHIKTPV 605
AN ++V +L A++R A+ +R+E ++F + A IN W + T G IK +
Sbjct: 102 ANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAGRIKDFL 161
Query: 606 SEDKIDPATAVAMFNVIFFQGHWHVPFNASETEE 707
+D +D AT + N ++F+G W F+A T +
Sbjct: 162 PKDAVDRATPAVLGNALYFKGDWESKFDARSTSD 195
>11_01_0771 + 6453130-6454488
Length = 452
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +3
Query: 555 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEK 710
IN WA T I + + P TAV + N I+F+G W PFN S+TE K
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERK 228
>01_01_1152 + 9170628-9171899
Length = 423
Score = 45.2 bits (102), Expect = 7e-05
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 534 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 701
P+ A + +N + + T+G I+ + + +D +T V + N + F+G W +PF+ S T
Sbjct: 156 PEQARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSAT 211
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.8 bits (101), Expect = 1e-04
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Frame = +3
Query: 384 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADII 557
+L R P+ L A ++ L+ F A N++ S +F + P++A D I
Sbjct: 88 VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146
Query: 558 NRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEK-----DSTS 722
N W + T+G + T + ID T + + + ++F+G W + T E+ D TS
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTS 206
Query: 723 MKNDHQETDNASLTVI 770
++ E D L +
Sbjct: 207 VEVPFVEYDRTRLFAV 222
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 546 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEE 707
A +N W D T G IK + +D T + + N ++F+G W F+AS+T++
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKD 59
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 42.3 bits (95), Expect = 5e-04
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Frame = +3
Query: 300 SGAGAQSKEEIREILGGG---EAQESTHT---YGLLNQRYAEFDPKFLTVANKIYVSDQY 461
+GA + +E+ +LG + +ES GL ++ A P+ ++ A ++ +
Sbjct: 49 AGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADES-ASGGPR-VSDACGVWHDETL 106
Query: 462 KLADAF-SRTANLFRSEVDNINFSA-PKNAADIINRWADEQTQGHIKTPVSEDKIDPATA 635
+L A+ + A +++ NF PK + IN+W + T I + + + TA
Sbjct: 107 ELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDTA 166
Query: 636 VAMFNVIFFQGHWHVPFNASET 701
+ + N I+F+G W PF S T
Sbjct: 167 LVLVNAIYFKGKWSNPFPRSST 188
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 546 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEE 707
A +N W ++ T G IK + +D T + + N ++F+G W F+AS+T++
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKD 267
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 555 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEE 707
+N W D T G IK + I+ T + + N ++F+G W F+ S+TE+
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTED 519
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 534 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 701
PK++ IN+W + T I+ + + + TA+ + N I+F+G W PF T
Sbjct: 121 PKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERT 176
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +3
Query: 444 YVSDQYKLADAF-SRTANLFRSEVDNINF-SAPKNAADIINRWADEQTQGHIKTPVSEDK 617
++ Y L A+ ++ ++F + P A IN W T+ I + +
Sbjct: 23 WLDASYSLKPAYRDAIVGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPES 82
Query: 618 IDPATAVAMFNVIFFQGHWHVPFNASETEEKD 713
T + N I+F+G W PF+ S+T E++
Sbjct: 83 QSVDTRHVVGNAIYFKGEWLAPFDKSDTAERE 114
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 37.1 bits (82), Expect = 0.019
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 534 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASET 701
PK + IN W + T I + + + T + + N I+F+G W PF T
Sbjct: 83 PKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPREST 138
>05_06_0044 - 25150322-25151260
Length = 312
Score = 35.1 bits (77), Expect = 0.078
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Frame = +3
Query: 441 IYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDK 617
++V +L AF+ TA ++F++ V + A A IN W QT G +K +S
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRSAGNPAAARAE--INEWFSSQTGGFVKDILSNSI 60
Query: 618 IDP-----------ATAVAMFNVIFFQGHWHVPFNASETEEKD 713
D + +V + N ++F +W PF TEE D
Sbjct: 61 DDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGD 103
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 366 TLEPPLPQGFPLSLPWTVHRLQTRXK 289
+L PPLP G PLS P+ QT K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776
>01_01_1013 - 8015552-8015613,8016898-8018035
Length = 399
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 212 ILKESYNLADDKNVIASPLGVMLL-LSLXRVWSRCTVQGRDKGNPWGRGGSRVN-THIRI 385
I K +++AD ++ S +L+ S+ +W+ V + PWG G V+ T +
Sbjct: 153 ITKTIFHVADLHPIVGSDKAALLIYFSVPEIWATHVVDYPPRDRPWGGNGVVVHKTIVWW 212
Query: 386 IKSALRRIRPEILDCRQ*NIRFRPV 460
+ + + +I RQ N+RF P+
Sbjct: 213 VDLSYGLLSCDISARRQ-NLRFVPL 236
>01_06_1263 +
35840502-35841308,35841763-35841969,35842272-35842370,
35843361-35843464,35844521-35844698,35844774-35845244,
35845383-35845523,35846290-35846349,35846427-35846490,
35847295-35847524,35847606-35847704
Length = 819
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +1
Query: 337 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 516
K+ +G L +++ + + + +N T + S K P S S RSP +R S +
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434
Query: 517 TLTSALRRMPLISSTVGRTN 576
++ LIS +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,052,031
Number of Sequences: 37544
Number of extensions: 519503
Number of successful extensions: 1419
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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