Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_P08
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162...    52   5e-07
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315...    47   2e-05
07_01_1078 - 9707125-9707640,9708091-9708306,9708312-9709685,970...    35   0.100
02_04_0275 - 21469391-21470650                                         31   0.93 
02_03_0049 + 14421408-14421942,14421988-14422842,14423847-144241...    31   1.2  
08_01_0722 + 6412654-6412860,6413142-6413687,6413745-6413877,641...    30   2.1  
05_03_0577 + 15671570-15672432,15672571-15672785,15672825-156729...    30   2.8  
05_03_0313 + 12200743-12200955,12201238-12201622,12201997-122022...    29   3.8  
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101...    29   5.0  
12_02_0396 + 18577574-18578056,18578094-18578723                       29   6.6  
11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861           29   6.6  
07_01_0711 + 5374717-5374992,5375022-5375277,5375317-5375384,537...    29   6.6  
12_01_0899 - 8689125-8689383,8689540-8689826                           28   8.7  
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060...    28   8.7  
06_01_0801 - 5993726-5994160,5994811-5994969,5995071-5995211,599...    28   8.7  
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729...    28   8.7  
02_01_0674 + 5020118-5020202,5020301-5020436,5021075-5021140,502...    28   8.7  

>06_03_0510 -
           21615724-21615909,21615992-21616075,21616164-21616217,
           21616324-21616371,21616529-21616611,21616963-21617113,
           21617648-21617785,21617966-21618094,21618391-21618596,
           21618734-21618845,21619145-21619204,21619331-21619429,
           21619520-21619575,21620230-21620313,21621407-21621500
          Length = 527

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
 Frame = +3

Query: 423 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 599
           +G  L ++ +   V VF G   +  +   V+ TG ++  PV   +LGR+ +  G PID  
Sbjct: 97  RGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNG 156

Query: 600 GPIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQR 737
            PI  ++ + +   +     R    E +QTGI  +D +  I RGQ+
Sbjct: 157 PPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 202


>01_06_0458 +
           29531069-29531126,29531247-29531302,29531407-29531505,
           29531989-29532048,29532285-29532396,29532459-29532694,
           29533092-29533220,29533325-29533462,29534043-29534193,
           29534394-29534476,29534658-29534705,29534828-29534881,
           29534971-29535054,29535152-29535337
          Length = 497

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
 Frame = +3

Query: 423 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGK 599
           +G  L ++ +   V VF G   +  +   V+ TG ++  PV   +LGRV +  G PID  
Sbjct: 57  RGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNG 116

Query: 600 GPIDTK-----SRMRVGIKAPG--IIP--RVSVREPMQTGIKAVDSLVPIGRGQR 737
            PI  +     S   +G    G  I P  R    E +QTGI  +D +  I RGQ+
Sbjct: 117 PPILPEAYLDISDFDIGFAGAGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 171


>07_01_1078 -
           9707125-9707640,9708091-9708306,9708312-9709685,
           9709704-9710044,9710120-9710198
          Length = 841

 Score = 34.7 bits (76), Expect = 0.100
 Identities = 22/67 (32%), Positives = 33/67 (49%)
 Frame = +3

Query: 180 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLGAAPKADLEETGRVLSIGDGI 359
           +P+ + WR P      +  + QP  K P SPP SK+G +G A + +L E  R   I    
Sbjct: 635 MPKNRYWRTPVKSPVPSMKLEQPAQKKPSSPPKSKKG-VGFAHREELREECRRAFIPGVD 693

Query: 360 ARVYGLK 380
           +   G+K
Sbjct: 694 SSTVGIK 700


>02_04_0275 - 21469391-21470650
          Length = 419

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 420 GLRRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQP 310
           G RRT  +   G SS+H H RY  Q SRH  +   QP
Sbjct: 345 GTRRTAMATDVGTSSNH-HVRYRFQDSRHCHAAPQQP 380


>02_03_0049 +
           14421408-14421942,14421988-14422842,14423847-14424151,
           14424469-14424984
          Length = 736

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 180 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 287
           +PR + WR P     LA  + QP  K P S P SK+
Sbjct: 412 MPRNRYWRTPVKSPVLAKKLEQPAQKRPSSAPKSKK 447


>08_01_0722 +
           6412654-6412860,6413142-6413687,6413745-6413877,
           6413917-6414035,6414128-6414883,6415209-6415258,
           6415560-6416679
          Length = 976

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 180 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLG 299
           +PR + WR P  P   A  + Q   K P SPP  K+  +G
Sbjct: 552 MPRNRYWRLPVKPPIPAKKLEQLAQKKPPSPPKPKKPKVG 591


>05_03_0577 +
           15671570-15672432,15672571-15672785,15672825-15672954,
           15672990-15673794,15674505-15674715,15674829-15675436
          Length = 943

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 177 LLPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLGAAPKADLEET 329
           ++PR + W+ P  P   A  + Q   K P S P  ++GS  ++   D   T
Sbjct: 635 MMPRNRYWKTPVKPPIPAKKLEQSAQKKPPSAPKPRKGSSSSSSHHDESST 685


>05_03_0313 +
           12200743-12200955,12201238-12201622,12201997-12202274,
           12202359-12202976
          Length = 497

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 180 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 287
           +P+ + W+ P  P  LA  + QP  K P S P  K+
Sbjct: 440 MPKNRYWKMPVEPPILAKKLEQPAQKKPPSAPKPKK 475


>08_02_1462 +
           27308792-27308924,27309711-27309778,27309854-27310159,
           27310168-27310839
          Length = 392

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
 Frame = +3

Query: 600 GPIDTKSRMR-VGIKAPGI-------IPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGD 755
           GP D + RM+ VGI    +       I    V+EPM  G +    +  +G G   L +GD
Sbjct: 45  GPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMVIGHECAGVIEEVGSGVTHLAVGD 104

Query: 756 R 758
           R
Sbjct: 105 R 105


>12_02_0396 + 18577574-18578056,18578094-18578723
          Length = 370

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 180 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 287
           +PR + WR P  P   A  + QP  + P S P  K+
Sbjct: 313 MPRNRYWRTPVKPSTPAKKLEQPAQRKPPSAPKPKK 348


>11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861
          Length = 592

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +3

Query: 636 IKAPGIIPRVSVREPMQTGIKAVDSL-VPIGRG 731
           I + G++P +S+R   +TG +  D L  P+GRG
Sbjct: 511 IHSNGVVPSLSLRHAGETGGRGGDGLATPVGRG 543


>07_01_0711 +
           5374717-5374992,5375022-5375277,5375317-5375384,
           5375556-5376287,5377013-5377270
          Length = 529

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 180 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGS 293
           +PR + W+ P      A  + QP  + P S P  K+GS
Sbjct: 409 MPRNRYWKTPVKSSTPAKKLEQPAQRKPSSAPKPKKGS 446


>12_01_0899 - 8689125-8689383,8689540-8689826
          Length = 181

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 183 PRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLGAAP 308
           P C R   P+ PW +A    +PP      PP+   G+  + P
Sbjct: 38  PPCARLLLPEPPWGMAALPPEPPWGAAAHPPAPHWGAGPSRP 79


>08_02_0104 +
           12404890-12405129,12405244-12405333,12405953-12406036,
           12406888-12407132,12409032-12409095,12409270-12409968,
           12410063-12410176,12410287-12410418,12410594-12410770,
           12411085-12411138,12411230-12411292,12411396-12412307,
           12412408-12412535,12413680-12413962
          Length = 1094

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 213 WPWHLANYMSQPPTKLPRSPPSSKRGSLGAAPKAD 317
           WP H  NY+S+  T  PR P   K        +AD
Sbjct: 700 WPEHCKNYLSRVGTLKPRHPRWQKSDDATEVSEAD 734


>06_01_0801 -
           5993726-5994160,5994811-5994969,5995071-5995211,
           5995999-5996097,5996180-5996542,5996929-5997150,
           5997257-5997448,5997997-5998056,5998162-5998378,
           5998471-5998523,5999013-5999084,5999928-6000113,
           6000986-6001132,6002902-6003075,6003149-6003300,
           6004269-6004360,6004549-6004710,6004875-6005053,
           6005173-6005304,6005454-6005507,6006082-6006191,
           6006317-6006487,6006577-6006663,6008488-6008611,
           6009355-6009564
          Length = 1330

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = +3

Query: 246 PPTKLPRSPPSSKRGSLGAAPKADLEETGRVLSIGDGI--ARVYGLK-NIQAEEMVEFSS 416
           PPT +PR+PP++       A  A +    R+  + D +  AR   L+   +A +++E+S+
Sbjct: 32  PPTAMPRAPPTAMVARAAGADGAVVPVADRLDQLADSVQLAREDCLELRQEASDLLEYSN 91

Query: 417 GLKG 428
              G
Sbjct: 92  AKLG 95


>03_02_0308 -
           7297228-7298008,7298495-7298576,7298612-7298669,
           7298723-7298835,7298924-7299034,7299480-7299597,
           7299706-7299809,7300570-7300665,7301806-7302307
          Length = 654

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = -3

Query: 465 PHPHCQVPS*GPFP*GLRRTPPSPQPGCSSSHKHERY--HHQCS 340
           PH   Q P   P P      PP  +P  S+SH H R+  HH  S
Sbjct: 110 PHHQQQGPGASPSP---PPPPPRGRPSFSASHSHHRHGGHHHRS 150


>02_01_0674 +
           5020118-5020202,5020301-5020436,5021075-5021140,
           5021219-5021290,5021362-5021433,5024242-5024301,
           5024494-5024565,5024655-5024720,5024798-5024863,
           5024945-5025273,5025713-5025969,5026213-5026484,
           5026580-5026715,5026833-5026972,5027051-5027207,
           5027476-5027634
          Length = 714

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 246 PPTKLPRSPPSSKRGSLGAAPKADLEETGR 335
           PP + PR+ PS  RGS G AP+  +   G+
Sbjct: 252 PPPRRPRNRPSHPRGS-GDAPEGSVSPAGQ 280


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,728,054
Number of Sequences: 37544
Number of extensions: 544835
Number of successful extensions: 1878
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)