Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_P07
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 39 0.005
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 38 0.011
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 38 0.014
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 36 0.043
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 35 0.074
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 34 0.17
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 33 0.30
03_04_0169 - 17959262-17959304,17959441-17959532,17959682-179597... 31 0.92
06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525... 29 3.7
05_06_0028 + 25055750-25056082 29 4.9
03_02_0860 - 11864510-11864732,11864867-11865191,11866213-11867779 29 4.9
03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873... 29 6.5
05_07_0159 + 28084303-28084809 28 8.5
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 39.1 bits (87), Expect = 0.005
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 405 DPPAMHKPDNTNGQQDENKYSLSNNVASSTGGARLCAQCGKVITERFLLKAMERFWHEDC 584
+PP + P + + + STG R+CA C I + L M+ WH C
Sbjct: 144 EPPRQNVPVKDVHSESTPATFMPPYIFPSTG-LRVCAGCKTPIGQGRFLSCMDSVWHPQC 202
Query: 585 LKCGCCDCRLGE 620
+C CD + E
Sbjct: 203 FRCFACDRPISE 214
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/69 (31%), Positives = 28/69 (40%)
Frame = +3
Query: 399 IRDPPAMHKPDNTNGQQDENKYSLSNNVASSTGGARLCAQCGKVITERFLLKAMERFWHE 578
+ PP + N NG N Y + SS G R CA C I L M WH
Sbjct: 526 VESPPRARENGNANGG---NMYQPLPFMFSS--GFRTCAGCHSEIGHGRFLSCMGAVWHP 580
Query: 579 DCLKCGCCD 605
+C +C C+
Sbjct: 581 ECFRCHACN 589
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 37.5 bits (83), Expect = 0.014
Identities = 22/80 (27%), Positives = 31/80 (38%)
Frame = +3
Query: 489 STGGARLCAQCGKVITERFLLKAMERFWHEDCLKCGCCDCRLGEVGSKLYYKADLMLCKR 668
++ G+R CA C I L M+ WH C +C C+ + E ++ D K
Sbjct: 250 ASSGSRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMH--EDQPYHKS 307
Query: 669 DYLRLFGATGNCVACNKVIP 728
Y F C C IP
Sbjct: 308 CYKDFFHP--KCDVCKNFIP 325
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 35.9 bits (79), Expect = 0.043
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +3
Query: 432 NTNGQQDENKYSLSNNVASSTGGARLCAQCGKVITERFLLKAMERFWHEDCLKCGCC 602
N N Q N + S A S G R+C C I L + +WH C +C C
Sbjct: 89 NMNPYQPYNPCAPSQTQARSRG-YRVCGGCKHEIGHGHYLSCLGMYWHPQCFRCSSC 144
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 35.1 bits (77), Expect = 0.074
Identities = 34/130 (26%), Positives = 50/130 (38%)
Frame = +3
Query: 312 SFTG*FFERNSIDQKRNRTL*CESDDIKMIRDPPAMHKPDNTNGQQDENKYSLSNNVASS 491
SF G + R DQ RT S D K P + KP+ T ++EN +S+ A
Sbjct: 53 SFEGVLYCRPHFDQLFKRT---GSLD-KSFEGTPKVVKPEKT--VENENAIKVSSAFA-- 104
Query: 492 TGGARLCAQCGKVITERFLLKAMERFWHEDCLKCGCCDCRLGEVGSKLYYKADLMLCKRD 671
G C C K + + +H+ C KC C + S + CK
Sbjct: 105 -GTREKCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISP--SNYIAHEGKLYCKHH 161
Query: 672 YLRLFGATGN 701
+++L GN
Sbjct: 162 HIQLIKEKGN 171
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 486 SSTGGARLCAQCGKVITERFLLKAMERFWHEDCLKCGCCDCRLGEVGSKLYYKAD-LMLC 662
S TG C C K + LL A +H+ C KC C G + Y D ++ C
Sbjct: 2 SFTGTQDKCKACDKTVHFIDLLTADGVSYHKTCFKCSHCK---GTLSMCNYSSMDGVLYC 58
Query: 663 KRDYLRLFGATGN 701
K + +LF TG+
Sbjct: 59 KTHFEQLFKETGS 71
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 375 CESDDIKMIRDPPAMHKPDNTNGQQDE--NKYSLSNNVASSTGGAR-LCAQCGKVITERF 545
C++ ++ ++ + K + G+ E ++ + ++S+ G + CA C K +
Sbjct: 58 CKTHFEQLFKETGSFSKKFSQGGKSSEKSDQGRAPSKLSSAFSGTQDKCAACQKTVYPLE 117
Query: 546 LLKAMERFWHEDCLKCGCCDCRLGEVGSKLYYKADLMLCKRDYLRLFGATGN 701
L +H+ C KC C L S ++ CK + +LF G+
Sbjct: 118 KLTLEGESYHKSCFKCSHGGCIL--TTSSYAALNGILYCKIHFSQLFKEKGS 167
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 486 SSTGGARLCAQCGKVITERFLLKAMERFWHEDCLKCGCCDCRLGEVGSKLYYKAD-LMLC 662
S TG C C K + LL A +H+ C KC C G + Y D ++ C
Sbjct: 2 SFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCK---GILSMCSYSSMDGVLYC 58
Query: 663 KRDYLRLFGATGN 701
K + +LF TG+
Sbjct: 59 KTHFEQLFKETGS 71
>03_04_0169 -
17959262-17959304,17959441-17959532,17959682-17959759,
17959938-17960075,17960174-17960302,17960556-17960685,
17960797-17960974,17961177-17961315,17961399-17961488,
17961633-17961794,17961966-17962130,17962250-17962387,
17962827-17963006,17963405-17963533,17963878-17964113,
17964233-17964395,17965260-17965628,17965724-17965828
Length = 887
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 564 RFWHEDCLKCGCCDCRLGEVGSKLYYKADLMLCKRDYLRLFGATGNCV 707
R W + C+ GC R+ + K+ AD +LC+ ++L L G+TG +
Sbjct: 475 RGWGKCCV-AGCSGIRVNDA-EKVVLVADKVLCEGEWLSLNGSTGEVI 520
>06_01_0721 -
5255422-5255790,5256287-5256660,5256845-5257192,
5257369-5257497,5257585-5257658,5257745-5257816,
5257901-5257969,5258059-5258130,5258208-5258279,
5258512-5258583,5258735-5258806,5258887-5258958,
5259050-5259121,5259203-5259274,5259427-5259498,
5259599-5259670,5259764-5259832,5260072-5260143,
5260428-5260499,5260579-5260650,5260919-5260990,
5261015-5261161,5261249-5261378,5262212-5262290
Length = 931
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 449 LLTVCIVGFMHGRWVSNHFDIVTFALQGSIPFLI-DRVSFKELSCKTPALL 300
+L C+ ++ G W ++FD+ + L G IP I D S K L K L+
Sbjct: 101 VLCCCLEMWLAGAWTRSNFDLKSNGLSGQIPDEIGDCSSLKTLILKNNQLI 151
>05_06_0028 + 25055750-25056082
Length = 110
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +3
Query: 441 GQQDENKYSLSNNVASSTGGARLCAQCGKVITERFLLKAMERFWHEDCLKCGCCDCRL 614
G +++ NV ++ GG LC C + + + E+ ED +K CR+
Sbjct: 12 GLEEDCTQEYIENVKANFGGKWLCGLCSEAVGDELSKDRREQDGIEDAIKAHMAFCRM 69
>03_02_0860 - 11864510-11864732,11864867-11865191,11866213-11867779
Length = 704
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -2
Query: 512 AKPRSSRRARHVVTQTVLIFILLTV-C-IVGFMHGRWVSNHFD 390
A + SR H +T+++ ++LT+ C +V + G W+S+H D
Sbjct: 344 APSKRSRLETHTNRETIVLAVVLTLLCTLVSLLAGIWLSDHSD 386
>03_05_0001 - 19386264-19386284,19386446-19386517,19386614-19387357,
19387454-19388884,19388953-19389118,19392035-19392114,
19392393-19392462,19392550-19392761,19392837-19392890,
19393471-19393623,19393715-19393930,19394029-19394248,
19394332-19394399,19394510-19394643,19394755-19394854,
19394943-19395421,19395506-19395699,19396270-19396355,
19396364-19396444,19396842-19397023,19397305-19397346,
19398247-19398558,19399374-19399434,19399435-19399617,
19399744-19399863,19400380-19401051,19402597-19402668,
19402742-19402865,19403563-19403651,19405023-19405097
Length = 2170
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 408 PPAMHKPDNTNGQQDENKYSLSNNVASSTGGARLCAQCGKVITERFLLKAMER 566
PP+MH D +++ S ++N+ SST L + + + F+ + ER
Sbjct: 1576 PPSMHVDDYVARERNIEGASSASNIVSSTPRGALSGRPPSIHVDEFMARQRER 1628
>05_07_0159 + 28084303-28084809
Length = 168
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 579 DCLKCGCCDCRLGEVGSKLYYKADLMLCKRDYLRL 683
DC+ GCC C L + S KA L + +R RL
Sbjct: 43 DCIALGCCPCALVSMLSLALVKAPLAVGRRCVGRL 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,728,581
Number of Sequences: 37544
Number of extensions: 442093
Number of successful extensions: 1097
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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