Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_O20
(924 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 5.2
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 29 5.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.2
06_03_0696 + 23617687-23617851,23618838-23619536 29 6.9
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 6.9
08_01_0060 - 413088-413999 25 8.2
09_03_0145 - 12749288-12751510 28 9.1
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 28 9.1
07_03_0890 - 22332768-22333382 28 9.1
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 9.1
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 28 9.1
01_05_0490 + 22672241-22674679 28 9.1
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 25 9.6
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
PPPPPPP PPPP
Sbjct: 563 PPPPPPPPPPPPLPQSNYASSQPPPPP 589
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
PPPPPPP PPPP
Sbjct: 666 PPPPPPPRSSSRTPTGAATSSKGPPPP 692
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
PPPPPPP PPPP
Sbjct: 690 PPPPPPPLPPANRTNGPGVPSAPPPPP 716
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
PPPPPPP PPPP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPP 570
Score = 24.2 bits (50), Expect(2) = 7.2
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -1
Query: 399 PPPXPPPKXGXKNXXXXXXXGKRXXPP 319
PPP PPP+ + K PP
Sbjct: 666 PPPPPPPRSSSRTPTGAATSSKGPPPP 692
Score = 22.6 bits (46), Expect(2) = 7.2
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = -1
Query: 456 PXPXPXXXXXXXXXXXKKXPPPXPPP 379
P P P PPP PPP
Sbjct: 618 PPPPPPPPPLPNHSVLPPPPPPPPPP 643
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
PPPPPPP PPPP
Sbjct: 269 PPPPPPPPMPPRTDNASTQAAPAPPPP 295
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
PPPPPPP PPPP
Sbjct: 350 PPPPPPPPPPPPPPPPKLNTAPKPPPP 376
>06_03_0696 + 23617687-23617851,23618838-23619536
Length = 287
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 812 PPPPPPXXXXXXXXXXXXXGXXPPPP 889
PPPPPP G PPPP
Sbjct: 77 PPPPPPPPPPPSPPATHDVGQPPPPP 102
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPP 886
PPPPPPP G PPP
Sbjct: 349 PPPPPPPAAPAAPRPPGPGPGPPPPP 374
>08_01_0060 - 413088-413999
Length = 303
Score = 24.6 bits (51), Expect(2) = 8.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 795 FXXXXPPPPPPP 830
F PPPPPPP
Sbjct: 26 FDQPPPPPPPPP 37
Score = 22.2 bits (45), Expect(2) = 8.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 810 PPPPPPPF 833
PPPPP PF
Sbjct: 36 PPPPPLPF 43
>09_03_0145 - 12749288-12751510
Length = 740
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 808 PPPPPPPXSXXXXXXXXXXXRGXPXPP 888
PPPPPPP G P PP
Sbjct: 31 PPPPPPPGIQPPPPALPGMPHGRPPPP 57
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
P PPPPP G PPPP
Sbjct: 428 PAPPPPPQKNPPPNLKGQCYGQPPPPP 454
>07_03_0890 - 22332768-22333382
Length = 204
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
PPPPPPP PPPP
Sbjct: 84 PPPPPPPPPPERAVPEAADTPPPPPPP 110
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 808 PPPPPPPXSXXXXXXXXXXXRGXPXPP 888
PPPPPPP + R P PP
Sbjct: 383 PPPPPPPDTRPPFMAPGVNARPLPPPP 409
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
PPPPPPP G PP P
Sbjct: 363 PPPPPPPPPRPPPPPPPIKKGAPPPAP 389
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 808 PPPPPPPXSXXXXXXXXXXXRGXPXPP 888
PPPPPPP + R P PP
Sbjct: 641 PPPPPPPTTRRSRKPPQPPSRPAPPPP 667
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 24.6 bits (51), Expect(2) = 9.6
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 811 PPPPPPXSXXXXXXXXXXXRGXPXPP 888
PPPPPP R P PP
Sbjct: 38 PPPPPPSPVPSPAPPPPPHRPSPSPP 63
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 808 PPPPPPPXS 834
P PPPPP S
Sbjct: 36 PSPPPPPPS 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,806,611
Number of Sequences: 37544
Number of extensions: 464595
Number of successful extensions: 25625
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11182
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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