Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_O20
         (924 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   4.7  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    29   4.7  
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    26   5.1  
AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily a...    28   8.2  

>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +2

Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
           PPPPPPP                PPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPP 635


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +2

Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
           PPPPPPP                PPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPP 461


>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 26.2 bits (55), Expect(2) = 5.1
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 810 PPPPPPPF 833
           PPPPPPPF
Sbjct: 792 PPPPPPPF 799



 Score = 21.0 bits (42), Expect(2) = 5.1
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 795 FXXXXPPPPPPP 830
           F    PPPPP P
Sbjct: 781 FALPVPPPPPVP 792


>AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 268 protein.
          Length = 881

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +2

Query: 809 PPPPPPPXXXXXXXXXXXXXGXXPPPP 889
           PPPPPPP                PPPP
Sbjct: 67  PPPPPPPPPLISILQQAPPPPPPPPPP 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,941,750
Number of Sequences: 27780
Number of extensions: 217400
Number of successful extensions: 5539
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2113
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)