Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_O15
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0097 + 9967351-9967969,9968180-9968259                           30   1.9  
01_06_1674 + 39072861-39073260,39073288-39073358,39073659-390737...    30   2.5  
12_01_0779 + 7129879-7130398,7130585-7130664                           29   3.3  

>11_03_0097 + 9967351-9967969,9968180-9968259
          Length = 232

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 20  LTIGNP*DLSSDHLTELVGCLDNGSKIFHFDNPDLC 127
           L +G    L+ D L EL GC+D G    + + P+LC
Sbjct: 123 LGVGRARSLTDDDLEELKGCVDLGFGFSYDEIPELC 158


>01_06_1674 +
           39072861-39073260,39073288-39073358,39073659-39073716,
           39074604-39074659,39075179-39075400
          Length = 268

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 26  IGNP*DLSSDHLTELVGCLDNGSKIFHFDNPDLC 127
           +G    L+ + L EL GCLD G    + + P+LC
Sbjct: 57  VGRTRSLTEEDLEELKGCLDLGFGFAYHEIPELC 90


>12_01_0779 + 7129879-7130398,7130585-7130664
          Length = 199

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 26  IGNP*DLSSDHLTELVGCLDNGSKIFHFDNPDLC 127
           +G    L+ D L EL GC+D G    + + P+LC
Sbjct: 93  VGRARSLTDDDLEELKGCVDLGFGFSYDEIPELC 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,577,840
Number of Sequences: 37544
Number of extensions: 229692
Number of successful extensions: 335
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)