Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_O10
         (961 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       32   0.59 
01_07_0082 - 40965947-40967023                                         32   0.78 
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   2.4  
07_03_1136 + 24218601-24218734,24218769-24219906                       30   3.1  
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440...    29   5.5  
06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312     29   5.5  
06_03_1150 + 28022633-28023374,28023501-28023565                       29   5.5  
02_05_0584 - 30135768-30135790,30136104-30136866                       28   9.6  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 32.3 bits (70), Expect = 0.59
 Identities = 20/51 (39%), Positives = 20/51 (39%)
 Frame = +3

Query: 429 PPPPXGXGFXFWXPXPXPXXXIPXPGXXGGGXGFPXPXGGXXXXPQXXGXP 581
           PPPP   G     P P P    P PG   GG   P P GG    P   G P
Sbjct: 354 PPPPPPKG-----PSPPPP---PPPGGKKGGPPPPPPKGGASRPPAAPGVP 396


>01_07_0082 - 40965947-40967023
          Length = 358

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
 Frame = +3

Query: 429 PPPPXGXGFXFWXPXPXPXXXIPXP---GXXGGGXGFPXPXGGXXXXPQXXGXPRK 587
           PPP  G G+    P P      P P      GGG G+P P  G     Q    P K
Sbjct: 256 PPPQYGYGYPAQPPPPQAGYGYPPPPPQAGYGGGYGYP-PQAGYGGYQQQAVKPAK 310


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 8/48 (16%)
 Frame = +3

Query: 429  PPPPXGXGFXFWXPXP--XPXXXIPXPGXXG------GGXGFPXPXGG 548
            PPPP G G     P P   P   +P PG  G      GG G P P GG
Sbjct: 1186 PPPPRGHGGVGGPPTPPGAPAPPMP-PGVPGGPPPPPGGRGLPAPPGG 1232


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 18/45 (40%), Positives = 19/45 (42%)
 Frame = -1

Query: 562 GXXXXPPWGXGXPXPPPXXPGXGIXXXGXGXGXQKXNPXPXGGGG 428
           G    PP G G   PP   PG G      G G  +  P P GGGG
Sbjct: 103 GGGARPPGGGGGGGPPSLPPGAG------GGGGARP-PAPGGGGG 140


>09_04_0684 -
           19442335-19442990,19443774-19443839,19443935-19444032,
           19444787-19445157
          Length = 396

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
 Frame = -1

Query: 532 GXPXPPPXX-PGXGIXXXGXGXGXQKXNPXPXGGG 431
           G P PPP    G      G G G Q  NP P  GG
Sbjct: 321 GPPPPPPSAYQGNNPGYQGGGPGYQGGNPPPYQGG 355


>06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312
          Length = 270

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
 Frame = +3

Query: 432 PPPXGXGFXFWXPXPXPXXXIPXPG--XXGGGXGFP 533
           PP  G GF F  P P P      PG      G GFP
Sbjct: 94  PPSAGSGFRFPFPLPLPFPAPASPGGAPPSSGSGFP 129


>06_03_1150 + 28022633-28023374,28023501-28023565
          Length = 268

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
 Frame = +3

Query: 432 PPPXGXGFXFWXPXPXPXXXIPXPG--XXGGGXGFP 533
           PP  G GF F  P P P      PG      G GFP
Sbjct: 94  PPSAGSGFRFPFPLPLPFPAPASPGGAPPSSGSGFP 129


>02_05_0584 - 30135768-30135790,30136104-30136866
          Length = 261

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 20/69 (28%), Positives = 22/69 (31%)
 Frame = +3

Query: 429 PPPPXGXGFXFWXPXPXPXXXIPXPGXXGGGXGFPXPXGGXXXXPQXXGXPRKXXFNQXP 608
           PP     GF F  P P P   +P PG    G     P  G    P     P     +  P
Sbjct: 85  PPSAGSGGFPFPLPFPLP---LPAPGSPAAG---APPSSGSSGFPFPMPSPLPLPAHGSP 138

Query: 609 XKGPKPXKG 635
             G  P  G
Sbjct: 139 AAGAPPSSG 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,342,676
Number of Sequences: 37544
Number of extensions: 314843
Number of successful extensions: 557
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)