Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_O10
(961 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 4.7
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 4.7
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 4.7
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 31 4.7
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 4.7
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 31 6.2
DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein. 31 6.2
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 31 6.2
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 31 6.2
AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein. 31 6.2
AL050341-5|CAI20432.1| 225|Homo sapiens collagen type IX alpha ... 31 6.2
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 31 6.2
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 31 6.2
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 31.5 bits (68), Expect = 4.7
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = -1
Query: 574 PXIWGXXXXPPWGXGXPXPPPXXPGXGI-XXXGXGXGXQKXNPXPXG---GGG 428
P G PP G P PP PG G G G G K P G GGG
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGG 221
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.5 bits (68), Expect = 4.7
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = -1
Query: 574 PXIWGXXXXPPWGXGXPXPPPXXPGXGI-XXXGXGXGXQKXNPXPXG---GGG 428
P G PP G P PP PG G G G G K P G GGG
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGG 221
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 31.5 bits (68), Expect = 4.7
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = -1
Query: 574 PXIWGXXXXPPWGXGXPXPPPXXPGXGI-XXXGXGXGXQKXNPXPXG---GGG 428
P G PP G P PP PG G G G G K P G GGG
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGG 221
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 31.5 bits (68), Expect = 4.7
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = -1
Query: 574 PXIWGXXXXPPWGXGXPXPPPXXPGXGI-XXXGXGXGXQKXNPXPXG---GGG 428
P G PP G P PP PG G G G G K P G GGG
Sbjct: 96 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGG 148
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.5 bits (68), Expect = 4.7
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = -1
Query: 574 PXIWGXXXXPPWGXGXPXPPPXXPGXGI-XXXGXGXGXQKXNPXPXG---GGG 428
P G PP G P PP PG G G G G K P G GGG
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGG 221
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 31.1 bits (67), Expect = 6.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 429 PPPPXGXGFXFWXPXPXPXXX---IPXPGXXGGGXGFPXPXGGXXXXP 563
PPPP G P P P IP P GG G P P G P
Sbjct: 692 PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPP 739
>DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein.
Length = 229
Score = 31.1 bits (67), Expect = 6.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 429 PPPPXGXGFXFWXPXPXPXXX---IPXPGXXGGGXGFPXPXGGXXXXP 563
PPPP G P P P IP P GG G P P G P
Sbjct: 86 PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPP 133
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 31.1 bits (67), Expect = 6.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 429 PPPPXGXGFXFWXPXPXPXXX---IPXPGXXGGGXGFPXPXGGXXXXP 563
PPPP G P P P IP P GG G P P G P
Sbjct: 692 PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPP 739
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 31.1 bits (67), Expect = 6.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 429 PPPPXGXGFXFWXPXPXPXXX---IPXPGXXGGGXGFPXPXGGXXXXP 563
PPPP G P P P IP P GG G P P G P
Sbjct: 702 PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPP 749
>AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein.
Length = 179
Score = 31.1 bits (67), Expect = 6.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 429 PPPPXGXGFXFWXPXPXPXXX---IPXPGXXGGGXGFPXPXGGXXXXP 563
PPPP G P P P IP P GG G P P G P
Sbjct: 86 PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPP 133
>AL050341-5|CAI20432.1| 225|Homo sapiens collagen type IX alpha 2
protein.
Length = 225
Score = 31.1 bits (67), Expect = 6.2
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -1
Query: 586 FRGXPXIWGXXXXPPWGXGXPXP--PPXXPGXGIXXXGXGXGXQKXNPXPXGGGG 428
FRG P G PP G P P PP PG G + P P G G
Sbjct: 3 FRGPPGAAGARRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAGPPGPKGEPG 57
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 31.1 bits (67), Expect = 6.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 429 PPPPXGXGFXFWXPXPXPXXX---IPXPGXXGGGXGFPXPXGGXXXXP 563
PPPP G P P P IP P GG G P P G P
Sbjct: 681 PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPP 728
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 31.1 bits (67), Expect = 6.2
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 429 PPPPXGXGFXFWXPXPXPXXX---IPXPGXXGGGXGFPXPXGGXXXXP 563
PPPP G P P P IP P GG G P P G P
Sbjct: 729 PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPP 776
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,435,101
Number of Sequences: 237096
Number of extensions: 1782730
Number of successful extensions: 3660
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3424
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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