Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_O10
         (961 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    36   0.043
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    31   0.93 
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    31   0.93 
Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    31   1.6  
Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical pr...    30   2.8  
U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical pr...    30   2.8  
U58748-7|AAM97987.1|  399|Caenorhabditis elegans Hypothetical pr...    30   2.8  
AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical ...    29   4.9  
Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical pr...    29   6.5  
X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2 prot...    29   6.5  
Z72502-7|CAA96592.1|  140|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +3

Query: 429 PPPPXGXGFXFWXPXPXPXXXIPX---PGXXGGGXGFPXPXGG 548
           PPPP G G     P   P   +P    P   GGG G P P GG
Sbjct: 34  PPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = -1

Query: 544 PWGXGXPXPPPXXPGXGIXXXGXGXGXQKXNPXPXGGGG 428
           P     P PPP  P  G+   G G       P P G GG
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = -1

Query: 544 PWGXGXPXPPPXXPGXGIXXXGXGXGXQKXNPXPXGGGG 428
           P     P PPP  P  G+   G G       P P G GG
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488


>Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical
           protein B0035.1b protein.
          Length = 341

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +3

Query: 432 PPPXGXGFXFWXPXPXPXXXIPXPGXXGGGXGFPXPXG-GXXXXPQXXGXPRKXXFNQ 602
           PPP G     + P P P   +P PG  G       P G G    P   G P++  F+Q
Sbjct: 160 PPPRG-----YPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQRSRFDQ 212


>Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical
           protein B0035.1a protein.
          Length = 298

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +3

Query: 432 PPPXGXGFXFWXPXPXPXXXIPXPGXXGGGXGFPXPXG-GXXXXPQXXGXPRKXXFNQ 602
           PPP G     + P P P   +P PG  G       P G G    P   G P++  F+Q
Sbjct: 160 PPPRG-----YPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQRSRFDQ 212


>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/39 (38%), Positives = 15/39 (38%)
 Frame = +3

Query: 429 PPPPXGXGFXFWXPXPXPXXXIPXPGXXGGGXGFPXPXG 545
           PPPP G G     P   P    P PG  G   G P   G
Sbjct: 435 PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARG 473



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/70 (28%), Positives = 21/70 (30%)
 Frame = +3

Query: 429 PPPPXGXGFXFWXPXPXPXXXIPXPGXXGGGXGFPXPXGGXXXXPQXXGXPRKXXFNQXP 608
           PPP       F  P   P    P  G   G  G P P       PQ  G P     +   
Sbjct: 321 PPPQGAPQQGFGAPPQGP----PQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPG 376

Query: 609 XKGPKPXKGP 638
              P P  GP
Sbjct: 377 NFAPPPQSGP 386


>Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.3 protein.
          Length = 283

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
 Frame = -1

Query: 547 PPWGXGXPXP--PPXXPGXGIXXXGXGXGXQKXNPXPXGGGG 428
           PP   G P P  PP  PG      G G G  +  P P G  G
Sbjct: 143 PPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPG 184


>Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.2 protein.
          Length = 283

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
 Frame = -1

Query: 547 PPWGXGXPXP--PPXXPGXGIXXXGXGXGXQKXNPXPXGGGG 428
           PP   G P P  PP  PG      G G G  +  P P G  G
Sbjct: 143 PPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPG 184


>U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical
           protein ZK180.5a protein.
          Length = 542

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
 Frame = -1

Query: 547 PPWGXGXPXPPPXXP-----GXGIXXXGXGXGXQKXNPXPXGGGGXF 422
           PP G G P PPP  P     G G    G G G Q       G  G +
Sbjct: 58  PPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAGGQYDTGVHGGAQGGY 104


>U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK180.5b protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
 Frame = -1

Query: 547 PPWGXGXPXPPPXXP-----GXGIXXXGXGXGXQKXNPXPXGGGGXF 422
           PP G G P PPP  P     G G    G G G Q       G  G +
Sbjct: 58  PPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAGGQYDTGVHGGAQGGY 104


>U58748-7|AAM97987.1|  399|Caenorhabditis elegans Hypothetical
           protein ZK180.5c protein.
          Length = 399

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
 Frame = -1

Query: 547 PPWGXGXPXPPPXXP-----GXGIXXXGXGXGXQKXNPXPXGGGGXF 422
           PP G G P PPP  P     G G    G G G Q       G  G +
Sbjct: 58  PPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAGGQYDTGVHGGAQGGY 104


>AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical
           protein T22D1.2 protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -1

Query: 547 PPWGXGXPXPPPXXPGXGIXXXGXGXGXQKXNPXPXGGG 431
           PP G G P PPP   G      G G   ++  P P G G
Sbjct: 223 PPKGTGSPTPPP--TGEPQDLSGEGNASRRPPPPPKGTG 259


>Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical
           protein F53F1.5 protein.
          Length = 215

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
 Frame = +3

Query: 429 PPPPXGXGFXFWXPXPXPXXXIPXPG--XXGGGXGFPXP 539
           PPPP G G     P   P   +P       GGG G P P
Sbjct: 34  PPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72


>X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2
           protein.
          Length = 231

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
 Frame = +3

Query: 429 PPPPXGXGFXFWXPXPXPXXXIPXPG--XXGGGXGFPXP 539
           PPPP G G     P   P   +P       GGG G P P
Sbjct: 34  PPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72


>Z72502-7|CAA96592.1|  140|Caenorhabditis elegans Hypothetical
           protein C08B6.10 protein.
          Length = 140

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 565 WGXXXXPPWGXGXPXPPPXXPGXGI 491
           W     PPWG   P PPP     G+
Sbjct: 116 WWRRPPPPWGPPPPGPPPPFGWRGL 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,956,970
Number of Sequences: 27780
Number of extensions: 201472
Number of successful extensions: 512
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)