Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_O03
         (854 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029067-1|AAH29067.1|   65|Homo sapiens chromosome 13 open read...    55   3e-07
AL138960-2|CAI12995.1|   65|Homo sapiens RP11-269C23.1 protein.        55   3e-07
CR533472-1|CAG38503.1|   66|Homo sapiens SERP1 protein.                44   5e-04
BC112365-1|AAI12366.1|   66|Homo sapiens stress-associated endop...    44   5e-04
BC112364-1|AAI12365.1|   66|Homo sapiens stress-associated endop...    44   5e-04
BC108314-1|AAI08315.1|   66|Homo sapiens stress-associated endop...    44   5e-04
AF136975-1|AAG49436.1|   66|Homo sapiens ribosome attached membr...    44   5e-04
AB022427-1|BAA81895.1|   66|Homo sapiens SERP1 protein.                44   5e-04

>BC029067-1|AAH29067.1|   65|Homo sapiens chromosome 13 open reading
           frame 21 protein.
          Length = 65

 Score = 55.2 bits (127), Expect = 3e-07
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKEKEDQYPVAPW 270
           M   QR+R ANE  SKNIT RGNV KT + +E++YPV PW
Sbjct: 1   MVAKQRIRMANEKHSKNITQRGNVAKTLRPQEEKYPVGPW 40



 Score = 42.3 bits (95), Expect = 0.002
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +3

Query: 276 LPLFIFVVCGSAVFQIIQSIRL 341
           L LF+FVVCGSA+FQIIQSIR+
Sbjct: 42  LALFVFVVCGSAIFQIIQSIRM 63


>AL138960-2|CAI12995.1|   65|Homo sapiens RP11-269C23.1 protein.
          Length = 65

 Score = 55.2 bits (127), Expect = 3e-07
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKEKEDQYPVAPW 270
           M   QR+R ANE  SKNIT RGNV KT + +E++YPV PW
Sbjct: 1   MVAKQRIRMANEKHSKNITQRGNVAKTLRPQEEKYPVGPW 40



 Score = 42.3 bits (95), Expect = 0.002
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +3

Query: 276 LPLFIFVVCGSAVFQIIQSIRL 341
           L LF+FVVCGSA+FQIIQSIR+
Sbjct: 42  LALFVFVVCGSAIFQIIQSIRM 63


>CR533472-1|CAG38503.1|   66|Homo sapiens SERP1 protein.
          Length = 66

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKE-KEDQYPVAPW 270
           M   QR+R ANE  SKNIT RGNV KT++   E++  V PW
Sbjct: 1   MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPW 41



 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +3

Query: 276 LPLFIFVVCGSAVFQIIQSIRL 341
           L LFIFVVCGSA+FQIIQSIR+
Sbjct: 43  LALFIFVVCGSAIFQIIQSIRM 64


>BC112365-1|AAI12366.1|   66|Homo sapiens stress-associated
           endoplasmic reticulum protein 1 protein.
          Length = 66

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKE-KEDQYPVAPW 270
           M   QR+R ANE  SKNIT RGNV KT++   E++  V PW
Sbjct: 1   MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPW 41



 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +3

Query: 276 LPLFIFVVCGSAVFQIIQSIRL 341
           L LFIFVVCGSA+FQIIQSIR+
Sbjct: 43  LALFIFVVCGSAIFQIIQSIRM 64


>BC112364-1|AAI12365.1|   66|Homo sapiens stress-associated
           endoplasmic reticulum protein 1 protein.
          Length = 66

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKE-KEDQYPVAPW 270
           M   QR+R ANE  SKNIT RGNV KT++   E++  V PW
Sbjct: 1   MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPW 41



 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +3

Query: 276 LPLFIFVVCGSAVFQIIQSIRL 341
           L LFIFVVCGSA+FQIIQSIR+
Sbjct: 43  LALFIFVVCGSAIFQIIQSIRM 64


>BC108314-1|AAI08315.1|   66|Homo sapiens stress-associated
           endoplasmic reticulum protein 1 protein.
          Length = 66

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKE-KEDQYPVAPW 270
           M   QR+R ANE  SKNIT RGNV KT++   E++  V PW
Sbjct: 1   MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPW 41



 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +3

Query: 276 LPLFIFVVCGSAVFQIIQSIRL 341
           L LFIFVVCGSA+FQIIQSIR+
Sbjct: 43  LALFIFVVCGSAIFQIIQSIRM 64


>AF136975-1|AAG49436.1|   66|Homo sapiens ribosome attached membrane
           protein 4 protein.
          Length = 66

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKE-KEDQYPVAPW 270
           M   QR+R ANE  SKNIT RGNV KT++   E++  V PW
Sbjct: 1   MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPW 41



 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +3

Query: 276 LPLFIFVVCGSAVFQIIQSIRL 341
           L LFIFVVCGSA+FQIIQSIR+
Sbjct: 43  LALFIFVVCGSAIFQIIQSIRM 64


>AB022427-1|BAA81895.1|   66|Homo sapiens SERP1 protein.
          Length = 66

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKE-KEDQYPVAPW 270
           M   QR+R ANE  SKNIT RGNV KT++   E++  V PW
Sbjct: 1   MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPW 41



 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +3

Query: 276 LPLFIFVVCGSAVFQIIQSIRL 341
           L LFIFVVCGSA+FQIIQSIR+
Sbjct: 43  LALFIFVVCGSAIFQIIQSIRM 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,601,402
Number of Sequences: 237096
Number of extensions: 1922792
Number of successful extensions: 3257
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3257
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)