Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_O03
         (854 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    55   7e-08
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    51   9e-07
AC024882-17|AAF60937.1|  321|Caenorhabditis elegans Serpentine r...    31   0.79 
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z81583-4|CAB04669.1|  323|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKEKEDQYPVAPW 270
           MAP QRM  AN+  SKN+  RGNV K+ K  ED+YP APW
Sbjct: 1   MAPKQRMTLANKQFSKNVNNRGNVAKSLKPAEDKYPAAPW 40



 Score = 34.7 bits (76), Expect = 0.085
 Identities = 13/20 (65%), Positives = 19/20 (95%)
 Frame = +3

Query: 282 LFIFVVCGSAVFQIIQSIRL 341
           LF+FVVCGSAVF+II+ +++
Sbjct: 44  LFVFVVCGSAVFEIIRYVKM 63


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 22/40 (55%), Positives = 26/40 (65%)
 Frame = +1

Query: 151 MAPXQRMRXANEIASKNITMRGNVPKTTKEKEDQYPVAPW 270
           MAP QRM  AN   SKN+T RGNVPK  K  E ++P + W
Sbjct: 1   MAPKQRMAVANAQFSKNVTQRGNVPKGNKTNESKFPTSQW 40



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/20 (65%), Positives = 19/20 (95%)
 Frame = +3

Query: 282 LFIFVVCGSAVFQIIQSIRL 341
           LFIFVVCGSA+F++I+ I++
Sbjct: 44  LFIFVVCGSAIFEVIRYIKV 63


>AC024882-17|AAF60937.1|  321|Caenorhabditis elegans Serpentine
           receptor, class z protein28 protein.
          Length = 321

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = -3

Query: 684 ITFIHYILMEFVA*VVFKNYIEKETKIHRKXXQSIPQXXPYNLMYRRSRFNPC 526
           IT +  IL+     VVF  Y   + KIH K  + IP     NL+Y+ S+   C
Sbjct: 25  ITILLLILLVIAKIVVFPFYSNVK-KIHEKTDKQIPMYPIMNLLYKMSKNTYC 76


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 308 CCVPD--NPINKTSLNHEDNWRTA 373
           CC P+  N +N  S+ H  NWRTA
Sbjct: 136 CCFPEVVNYLNTHSVGHVKNWRTA 159


>Z81583-4|CAB04669.1|  323|Caenorhabditis elegans Hypothetical
           protein T02G6.4 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 293 RSVWLCCVPDNPINKTSLNHEDNWRT 370
           RS+W CC+P    N  S   +  WRT
Sbjct: 275 RSMWSCCIPTTYYNNYSNALKIAWRT 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,347,200
Number of Sequences: 27780
Number of extensions: 307051
Number of successful extensions: 587
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)