Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_O01
(948 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK025905-1|BAB15277.1| 414|Homo sapiens protein ( Homo sapiens ... 32 2.7
AB073988-1|BAB83867.1| 414|Homo sapiens SRY-related HMG-box tra... 32 2.7
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 31 4.6
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 31 4.6
AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif prot... 31 4.6
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 31 4.6
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 31 4.6
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 31 4.6
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 31 4.6
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 31 4.6
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 31 4.6
>AK025905-1|BAB15277.1| 414|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22252 fis, clone HRC02734. ).
Length = 414
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 467 YLXXPYPPTXPL-PXLXPXPXTPSFPXLHXPP 559
Y P PP P+ P L P P PS P L PP
Sbjct: 259 YAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPP 290
>AB073988-1|BAB83867.1| 414|Homo sapiens SRY-related HMG-box
transcription factor SOX17 protein.
Length = 414
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 467 YLXXPYPPTXPL-PXLXPXPXTPSFPXLHXPP 559
Y P PP P+ P L P P PS P L PP
Sbjct: 259 YAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPP 290
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 434 PPFPTXRXXLFYLXXPYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXPXXSXP 592
PP P+ + P P P+P + P P PS P + P S P + P
Sbjct: 200 PPMPSIPP--IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXP 577
P PP P+P + P PS P + PP P
Sbjct: 186 PPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 434 PPFPTXRXXLFYLXXPYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXPXXSXP 592
PP P+ + P P P+P + P P PS P + P S P + P
Sbjct: 200 PPMPSIPP--IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXP 577
P PP P+P + P PS P + PP P
Sbjct: 186 PPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
>AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif protein
12 protein.
Length = 291
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 434 PPFPTXRXXLFYLXXPYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXPXXSXP 592
PP P+ + P P P+P + P P PS P + P S P + P
Sbjct: 200 PPMPSIPP--IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXP 577
P PP P+P + P PS P + PP P
Sbjct: 186 PPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 434 PPFPTXRXXLFYLXXPYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXPXXSXP 592
PP P+ + P P P+P + P P PS P + P S P + P
Sbjct: 200 PPMPSIPP--IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXP 577
P PP P+P + P PS P + PP P
Sbjct: 186 PPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 434 PPFPTXRXXLFYLXXPYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXPXXSXP 592
PP P+ + P P P+P + P P PS P + P S P + P
Sbjct: 200 PPMPSIPP--IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXP 577
P PP P+P + P PS P + PP P
Sbjct: 186 PPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 434 PPFPTXRXXLFYLXXPYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXPXXSXP 592
PP P+ + P P P+P + P P PS P + P S P + P
Sbjct: 200 PPMPSIPP--IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXP 577
P PP P+P + P PS P + PP P
Sbjct: 186 PPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 434 PPFPTXRXXLFYLXXPYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXPXXSXP 592
PP P+ + P P P+P + P P PS P + P S P + P
Sbjct: 200 PPMPSIPP--IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXP 577
P PP P+P + P PS P + PP P
Sbjct: 186 PPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 434 PPFPTXRXXLFYLXXPYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXPXXSXP 592
PP P+ + P P P+P + P P PS P + P S P + P
Sbjct: 200 PPMPSIPP--IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXP 577
P PP P+P + P PS P + PP P
Sbjct: 186 PPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 218
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 434 PPFPTXRXXLFYLXXPYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXPXXSXP 592
PP P+ + P P P+P + P P PS P + P S P + P
Sbjct: 220 PPMPSIPP--IPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 270
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 479 PYPPTXPLPXLXPXPXTPSFPXLHXPPXXSXXP 577
P PP P+P + P PS P + PP P
Sbjct: 206 PPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLP 238
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,780,996
Number of Sequences: 237096
Number of extensions: 992291
Number of successful extensions: 7626
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6654
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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