Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_N23
(878 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 183 7e-46
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 183 7e-46
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 183 7e-46
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 183 7e-46
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 183 7e-46
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 183 7e-46
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 183 7e-46
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 183 7e-46
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 183 7e-46
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 183 7e-46
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 181 3e-45
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 173 5e-43
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 120 7e-27
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 120 7e-27
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 55 4e-07
AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein. 31 7.3
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 18 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 77
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 78 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 137
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 138 RLAHEVGWKYQ 148
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 183 bits (446), Expect = 7e-46
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 181 bits (441), Expect = 3e-45
Identities = 78/131 (59%), Positives = 100/131 (76%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I
Sbjct: 20 AAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRI 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 173 bits (422), Expect = 5e-43
Identities = 75/131 (57%), Positives = 98/131 (74%)
Frame = +2
Query: 140 AAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKI 319
AA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N +P+RGP+HFRAPS++
Sbjct: 20 AAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNTSPSRGPYHFRAPSRV 79
Query: 320 LWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVG 499
W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D LKP R + ++G
Sbjct: 80 FWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLG 139
Query: 500 RLSHEIGWKYR 532
RL+HE+GWKY+
Sbjct: 140 RLAHEVGWKYQ 150
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 120 bits (289), Expect = 7e-27
Identities = 48/88 (54%), Positives = 64/88 (72%)
Frame = +2
Query: 269 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 448
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 449 XXXXFCLKPGRNYCHVGRLSHEIGWKYR 532
LKP R + ++GRL+HE+GWKY+
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQ 89
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 120 bits (289), Expect = 7e-27
Identities = 48/88 (54%), Positives = 64/88 (72%)
Frame = +2
Query: 269 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 448
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 449 XXXXFCLKPGRNYCHVGRLSHEIGWKYR 532
LKP R + ++GRL+HE+GWKY+
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQ 89
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 54.8 bits (126), Expect = 4e-07
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 341 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 520
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 521 WKYR 532
WKY+
Sbjct: 61 WKYQ 64
>AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein.
Length = 769
Score = 30.7 bits (66), Expect = 7.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 132 AVWRQSSPRSFSKGTKLLWFAANKSISLATSLGTNSSLCHSCVRGAT*ILLVDLSIL 302
+ WRQS PR + +G + L A ++ +L + T+ + C RG L LS+L
Sbjct: 30 SAWRQSRPREYYEGGRGL-HAPDRETALGLGIATSERMLGIC-RGRRKFLAASLSLL 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,060,202
Number of Sequences: 237096
Number of extensions: 1957883
Number of successful extensions: 7440
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7425
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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