Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_N21
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-10|CAB16516.1| 473|Caenorhabditis elegans Hypothetical p... 239 1e-63
AF025454-9|AAK68371.1| 331|Caenorhabditis elegans Serpentine re... 30 1.8
AC024881-7|AAK71417.1| 310|Caenorhabditis elegans Serpentine re... 29 4.3
Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical p... 28 7.4
Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical p... 28 7.4
AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical ... 28 7.4
Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 28 9.8
>Z99281-10|CAB16516.1| 473|Caenorhabditis elegans Hypothetical
protein Y57G11C.15 protein.
Length = 473
Score = 239 bits (586), Expect = 1e-63
Identities = 109/121 (90%), Positives = 118/121 (97%)
Frame = +1
Query: 193 MGIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 372
MGIKFLE +KPFC +PE++KPERKIQFREK+LWTAITLF+FLVCCQIPLFGIMS+DSAD
Sbjct: 1 MGIKFLEFVKPFCGFVPEVSKPERKIQFREKMLWTAITLFVFLVCCQIPLFGIMSTDSAD 60
Query: 373 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 552
PFYW+RVI+ASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
Sbjct: 61 PFYWLRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120
Query: 553 M 555
M
Sbjct: 121 M 121
Score = 97.5 bits (232), Expect = 1e-20
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = +3
Query: 612 PVKLVPEVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSWYPSG*LLQTSV-KPLXGKAFS 788
P ++ +CLLI++QL +AGLIVLLLDELLQKGYGLGS + T++ + + KAFS
Sbjct: 140 PSEIGAGICLLIVVQLVIAGLIVLLLDELLQKGYGLGSGISL--FIATNICETIVWKAFS 197
Query: 789 PATVNTGRGTXFXGAVIXWFHLLA 860
PAT+NTGRGT F GAVI FHLLA
Sbjct: 198 PATMNTGRGTEFEGAVIALFHLLA 221
Score = 62.1 bits (144), Expect = 5e-10
Identities = 37/74 (50%), Positives = 46/74 (62%)
Frame = +2
Query: 557 VITVGXAIVYVMTGMYGEPSEIGARSVPPHYHTTVCGRSYCVVAR*IAPERIWIGVLVSL 736
VITVG AIVYVM+G+YGEPSEIGA V ++ + + +G +SL
Sbjct: 122 VITVGQAIVYVMSGLYGEPSEIGAGICLLIVVQLVIAGLIVLLLDELLQKGYGLGSGISL 181
Query: 737 WLIATNICETIVWK 778
+ IATNICETIVWK
Sbjct: 182 F-IATNICETIVWK 194
>AF025454-9|AAK68371.1| 331|Caenorhabditis elegans Serpentine
receptor, class i protein61 protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 247 IAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVIL 399
IAK RK V+W + FI +C + LF D +IRV L
Sbjct: 119 IAKTLRKYIMPRWVVWCVLGFFIVYICAVVGLFSQTRRDEMHQMEYIRVNL 169
>AC024881-7|AAK71417.1| 310|Caenorhabditis elegans Serpentine
receptor, class sx protein3 protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 208 LEVIKPFCSI--LPEIAKPERKIQFREKVLWTAITLFIFLVCCQ 333
L V FC + LP IQ R + + AI+L+IF +C Q
Sbjct: 52 LSVSHIFCLLFELPNAVLLFTGIQLRRNICFPAISLYIFFICAQ 95
>Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = -2
Query: 847 NHXITAPXNXVPRPVLTVAGENAFPXNGFTDVCSN*PEGYQDPNPYPFWSNSSSNNTIRP 668
N I P + + P T+ + +P D + YQ P PYP S S SN+ P
Sbjct: 148 NKAINPPHSFLSNPANTLMRQGMYPAALNRDGFWY--QSYQRPMPYPTASPSYSNSFTNP 205
Query: 667 ATN 659
N
Sbjct: 206 IAN 208
>Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = -2
Query: 847 NHXITAPXNXVPRPVLTVAGENAFPXNGFTDVCSN*PEGYQDPNPYPFWSNSSSNNTIRP 668
N I P + + P T+ + +P D + YQ P PYP S S SN+ P
Sbjct: 148 NKAINPPHSFLSNPANTLMRQGMYPAALNRDGFWY--QSYQRPMPYPTASPSYSNSFTNP 205
Query: 667 ATN 659
N
Sbjct: 206 IAN 208
>AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical
protein Y38F1A.3 protein.
Length = 858
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 707 FLEQFIEQQHNKTGHKQLYDNEEAHFGHQFHWVRHTFQ 594
FL F +QQ KT H +L FGH+ + + FQ
Sbjct: 115 FLSMFRDQQIKKTAHVKLTYPSMDVFGHRVYLANNIFQ 152
>Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 622 WCPKCASSLSYNCLWPVLLCCCSMNCSR 705
WC +C S Y+C W CS+ C +
Sbjct: 124 WCWQCNSEAIYHCCWNT--AYCSVECQQ 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,894,536
Number of Sequences: 27780
Number of extensions: 446141
Number of successful extensions: 1184
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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