Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_N21
         (860 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          27   0.17 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      27   0.17 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   1.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.7  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -3

Query: 288 YFLSELNLTFWFRYFWQYTAERLNYFQK--FYSHF-DLLRFNYP 166
           Y+L   N T W+        +RLNYF +    +HF  +L  NYP
Sbjct: 197 YYLLAANYTGWYLTKHNVPEQRLNYFTEDVGLNHFYFMLNHNYP 240


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -3

Query: 288 YFLSELNLTFWFRYFWQYTAERLNYFQK--FYSHF-DLLRFNYP 166
           Y+L   N T W+        +RLNYF +    +HF  +L  NYP
Sbjct: 197 YYLLAANYTGWYLTKHNVPEQRLNYFTEDVGLNHFYFMLNHNYP 240


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 652 MIMRRHTSGTNFTGFAIHSSHYINNSXTNSN 560
           M + RH + T     A+  +HYI    TN N
Sbjct: 152 MFVARHLAETPKNTSAVRYTHYIGTLATNDN 182


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +2

Query: 644 HYHTTVCGRSYCVVAR*IAPERIWIGVLVSLWLIATNICETIVWKGI 784
           +Y  T    + C+V   + P      VL + WL  T+ C+  VW+ +
Sbjct: 81  NYFVTSLAFADCLVGLVVMPFSAIYEVLENRWLFTTDWCD--VWRSL 125


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 569 GXAIVYVMTGMYGEPSEIGARSVPPHYHTTVCGR 670
           G  + Y +  +Y     +G+   P H +  VCGR
Sbjct: 449 GALLSYFIEPIYFHSIVLGSLLNPSHMYRAVCGR 482


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,674
Number of Sequences: 438
Number of extensions: 6129
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)