Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_N17
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   3.0  
09_02_0603 - 11150739-11150746,11150791-11151340                       30   3.0  
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294...    29   5.2  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = -3

Query: 637 PPPPXKKXXPKKXFXPPPXXGVFFFXGGXKKXGXPPP 527
           PPPP     P +   PPP  G+     G K    PPP
Sbjct: 637 PPPPPPPSLPNRLVPPPPAPGI-----GNKFPAPPPP 668


>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = -3

Query: 652 FFLXXPPPPXKKXXP--KKXFXPPPXXGVFFFXGGXKKXGXPPP 527
           F    PPPP     P  +    PPP  G FF      +   PPP
Sbjct: 41  FGFPPPPPPGSTFVPLPQSGVPPPPPLGSFFVPPPQSRVPPPPP 84


>03_05_0843 +
           28126480-28127007,28127092-28127457,28129388-28129487,
           28130266-28130546,28130643-28130705,28131276-28131431,
           28131913-28132080,28132158-28132298,28132714-28132840,
           28132888-28132994,28134142-28134372,28134446-28134559,
           28135091-28135261
          Length = 850

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = -3

Query: 661 GXXFFLXXPPPPXKKXXPKKXFXPPPXXGVFFFXGGXKKXGXPPP 527
           G    +  PPPP     P+    PP    + +  GG    G  PP
Sbjct: 32  GAPAVMPPPPPPLPPPPPRSNSAPPERRALRWAAGGGSGGGNSPP 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,109,517
Number of Sequences: 37544
Number of extensions: 237736
Number of successful extensions: 655
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)