Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_N17
         (927 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical ...    31   1.2  
AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical ...    31   1.2  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    30   2.7  

>AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical
           protein R148.5b protein.
          Length = 505

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -3

Query: 637 PPPPXKKXXPKKXFXPPPXXGVFFFXGGXKKXGXPPP 527
           PPPP     P + F PPP      F GG      PPP
Sbjct: 322 PPPPHFGMGPPRGFMPPPHP--MMFRGGPYPPFFPPP 356


>AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical
           protein R148.5a protein.
          Length = 528

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -3

Query: 637 PPPPXKKXXPKKXFXPPPXXGVFFFXGGXKKXGXPPP 527
           PPPP     P + F PPP      F GG      PPP
Sbjct: 322 PPPPHFGMGPPRGFMPPPHP--MMFRGGPYPPFFPPP 356


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
 Frame = -3

Query: 637 PPPPXKK-XXPKKXFXPPPXXGVFF------FXGGXKKXGXPPP 527
           PPPP  +   P   F PPP  G+        F GG    G PPP
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPP 799


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,020,789
Number of Sequences: 27780
Number of extensions: 141112
Number of successful extensions: 328
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)