Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_N16
(898 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1560 - 27730241-27730336,27730471-27730644,27730746-277309... 54 1e-07
04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371 49 6e-06
09_06_0341 + 22406709-22407860 45 7e-05
08_02_1444 + 27135119-27135196,27135437-27135506,27135599-271357... 45 7e-05
08_02_1062 - 24016832-24016880,24016946-24016992,24017065-240171... 42 5e-04
08_01_0462 + 4072369-4072630,4072732-4072814,4072937-4073020,407... 41 0.002
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 41 0.002
11_03_0169 + 11102198-11102272,11103716-11103767,11104071-111041... 40 0.004
10_04_0002 - 7372425-7372601,7372697-7372780,7372859-7373010,737... 39 0.005
10_08_0301 - 16619499-16619675,16619770-16619853,16619932-166200... 38 0.014
02_05_1215 - 34982506-34982691,34982956-34983090,34983418-349834... 35 0.076
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 32 0.71
09_04_0073 - 14333096-14333290,14333377-14333638,14333811-143339... 31 1.6
08_02_1458 - 27270834-27271320,27271752-27271961,27272627-272736... 31 1.6
03_05_0042 + 20180151-20180468,20181595-20181665,20182929-201830... 30 2.2
09_02_0119 - 4481522-4481580,4481615-4481718,4483132-4483231,448... 30 2.9
06_03_0803 + 24737115-24737366,24738921-24739004,24739152-247392... 30 2.9
08_01_1050 - 10649434-10651917 29 3.8
06_01_0066 - 554637-555548 29 3.8
07_03_1763 - 29316969-29318120 29 5.0
03_02_1029 - 13488535-13493037 29 5.0
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 29 6.6
09_02_0555 - 10588685-10592038 29 6.6
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 29 6.6
01_04_0082 + 15835137-15836312 29 6.6
12_01_0092 + 726892-727247,727338-727347 28 8.8
11_01_0092 + 683869-684224,684315-684324 28 8.8
09_04_0688 + 19475847-19477034,19477133-19477384,19477778-194778... 28 8.8
03_06_0300 + 32967935-32968029,32968975-32969077,32969175-329692... 28 8.8
>07_03_1560 -
27730241-27730336,27730471-27730644,27730746-27730907,
27730993-27731101,27732268-27732374,27732875-27733141
Length = 304
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +1
Query: 418 DVIHLLETLREDYL-LGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFH 594
D ++ E LR+ + +++N +R + ++ L +FD V VS ++ EKP+ IF
Sbjct: 169 DAKYVFEALRKAGVKTAVVSNFDTRLR-PLLQALNCDHWFDAVAVSAEVAAEKPNPTIFL 227
Query: 595 EACKLLNVEPRNCIMVGDKLETDIKGGKEAELAATVW 705
+AC+ L V+P + +GD D+ G ++A A +W
Sbjct: 228 KACEFLGVKPEEAVHIGDDRRNDLWGARDAGCDAWLW 264
>04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371
Length = 417
Score = 48.8 bits (111), Expect = 6e-06
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 337 PKNYKHIAKSVSTEWLRLRFRYLALTNDVIHLLETLRE-DYLLGLITNGPSRAQWQKIER 513
P+ + +A + LR R+ L V+ L TL + D + + T P + + I+
Sbjct: 240 PQEVQRLAARKEVIYKTLRGRFYQLRPGVLDFLNTLVDFDIPIAITTPRPRLSLEEGIKA 299
Query: 514 LGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVGDKLET 660
+GL+ YFD ++ + D KP+ +F L +EP C+++G+ T
Sbjct: 300 VGLQGYFDAIVAAEDFCRGKPEGEMFEVTAGQLGLEPDVCLVLGNSNST 348
>09_06_0341 + 22406709-22407860
Length = 383
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 460 LGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIM 639
L + T P + + I+ +G+R +FD V+ + D+ KPD +F A +LL+ P CI+
Sbjct: 236 LAVATTRPRKVIEEAIDAVGVRSFFDAVVAAEDVYRGKPDPEMFLYAAQLLSFIPERCIV 295
Query: 640 VGD 648
G+
Sbjct: 296 FGN 298
>08_02_1444 +
27135119-27135196,27135437-27135506,27135599-27135758,
27136005-27136086,27136335-27136551,27136729-27136793,
27137039-27137293
Length = 308
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 547 VSGDLPWE-KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKEAELAA 696
+ G++ W KPD+ I+ A L V P CI VGD L DIKG + +A+
Sbjct: 212 LGGEVKWMGKPDKVIYTSAMSLAGVNPHECITVGDSLHHDIKGANASRVAS 262
>08_02_1062 -
24016832-24016880,24016946-24016992,24017065-24017124,
24017200-24017259,24017364-24017419,24017891-24017924,
24018015-24018089,24018348-24018398,24018495-24018539,
24019073-24019148,24019495-24019898
Length = 318
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Frame = +1
Query: 514 LGLRKY--FDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKEAE 687
+GL ++ DC L D+ +KPD I+ A + L V+ +NC++V D + ++ K A
Sbjct: 215 IGLERFNGLDCFLAGDDVKLKKPDPSIYITAAEKLGVQSQNCLVVEDSV-IGLQAAKGAG 273
Query: 688 LAATV-WIPLQKDEEISD----LPDITIDNVTELPEVLPNS 795
++ + + P +++ SD PD++ + +L +L S
Sbjct: 274 MSCIITYTPSTANQDFSDAIATYPDLSNVGLEDLKLLLQKS 314
>08_01_0462 +
4072369-4072630,4072732-4072814,4072937-4073020,
4073509-4073584,4073712-4073784,4073878-4073951,
4074158-4074251,4074374-4074443
Length = 271
Score = 40.7 bits (91), Expect = 0.002
Identities = 28/96 (29%), Positives = 47/96 (48%)
Frame = +1
Query: 460 LGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIM 639
L +++N +R + + ++ L + FD ++VS ++ EKP IF A + VE +
Sbjct: 171 LAVVSNFDTRLR-KLLKDLHVSDMFDAIVVSSEVGHEKPAPEIFKRALDQIGVEASKAVH 229
Query: 640 VGDKLETDIKGGKEAELAATVWIPLQKDEEISDLPD 747
VGD ET K G A + W+ Q S++ D
Sbjct: 230 VGDD-ETADKAGANA-IGLECWLWGQDVRTFSEIQD 263
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 40.7 bits (91), Expect = 0.002
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = +1
Query: 460 LGLITNGPSRAQWQKIERLGLRKYFDC--VLVSGD-LPWEKPDQHIFHEACKLLNVEPRN 630
L L +N R K+ L L+ + DC V++ GD +P KP IF EA K L V P +
Sbjct: 109 LALASNSVRRNIDHKL--LKLKDWKDCFSVILGGDQVPRGKPSPDIFLEAAKGLGVNPSS 166
Query: 631 CIMVGDKLETDIKGGKEAELAATVWIP-LQKDEEISDLPDITIDNVTEL-PEV 783
C+++ D L ++G + A A V +P LQ + + D + ++ + PE+
Sbjct: 167 CLVIEDSL-VGVQGAR-ASGAKVVAVPSLQSQRQHYSIADSILYSLLDFHPEL 217
>11_03_0169 +
11102198-11102272,11103716-11103767,11104071-11104185,
11104258-11104328,11105077-11105164,11105251-11105369,
11106276-11106278,11106327-11106397
Length = 197
Score = 39.5 bits (88), Expect = 0.004
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 328 NCLPKNYKHIAKSVSTEWLRL----RFRYLALTNDVIHLLETLREDYLLGLITNGPSRAQ 495
N L K + + +S E L+ + Y+ D+++ L+ + +Y + TN P Q
Sbjct: 26 NELAKKFFNDGRSFDLEGLKACMVRAYEYIDGVEDILYSLK--QNNYEVHAFTNYPVWYQ 83
Query: 496 WQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVGDKL 654
+ E+L L KY S + KP + A LNV+P +CI + D++
Sbjct: 84 LVE-EKLKLSKYLSWTFCSCTVGKRKPSPDFYLHAVDHLNVDPASCIFIDDRM 135
>10_04_0002 -
7372425-7372601,7372697-7372780,7372859-7373010,
7373229-7373324,7373406-7373554,7373723-7373788,
7373925-7373994,7374106-7374236,7376464-7376471,
7377946-7378002
Length = 329
Score = 39.1 bits (87), Expect = 0.005
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = +1
Query: 466 LITNGPSRAQWQKIE-RLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMV 642
L +N P KI G ++ F ++ ++ KP IF EA K +N P NC+++
Sbjct: 48 LASNSPGSNIEAKISCHQGWKESFSAIVGGDEVEKGKPSPDIFLEAAKRMNTNPPNCLVI 107
Query: 643 GDKLETDIKGGKEAELAATVWIPLQKDEEISDLPDITIDNVTELPEVLPNSPKLKRSTNM 822
D L K + A +A +P ++ E S ++ + L +V P L+ ++
Sbjct: 108 EDSLCCSWKSCRNACIAVPS-VP-KRTAEFSSADEV----INSLLDVRPEKWGLRPFSDW 161
Query: 823 SDD 831
DD
Sbjct: 162 IDD 164
>10_08_0301 -
16619499-16619675,16619770-16619853,16619932-16620083,
16620296-16620391,16620473-16620627,16620791-16620856,
16620993-16621062,16621175-16621305,16622121-16622307,
16622410-16622485
Length = 397
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 466 LITNGPSRAQWQKIE-RLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMV 642
L +N P KI G ++ F ++ ++ KP IF EA K +N P NC+++
Sbjct: 114 LASNSPRSNIDAKISCHQGWKESFSAIVGGDEVEKGKPSPDIFLEAAKRMNTNPPNCLVI 173
Query: 643 GDKLETDIKGGKEA 684
D L + GK A
Sbjct: 174 EDSL-PGVAAGKAA 186
>02_05_1215 -
34982506-34982691,34982956-34983090,34983418-34983478,
34984515-34984557,34984674-34984944
Length = 231
Score = 35.1 bits (77), Expect = 0.076
Identities = 25/74 (33%), Positives = 32/74 (43%)
Frame = +1
Query: 463 GLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMV 642
GLIT A +R G+ F L P+ KPD C N+ P +MV
Sbjct: 107 GLITRNVKTAVDLFHQRFGMM--FSPALSREFRPY-KPDPAPLLHICSTWNIPPNEVVMV 163
Query: 643 GDKLETDIKGGKEA 684
GD L+ D+ GK A
Sbjct: 164 GDSLKDDVVCGKRA 177
>03_02_0774 +
11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 31.9 bits (69), Expect = 0.71
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 532 FDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKEAEL-AATVWI 708
FD ++ + KP IF A K L V+ CI++ D L ++ K AE+ V
Sbjct: 210 FDAIVSADAFENLKPAPDIFLAASKTLGVDTDECIVIEDAL-AGVQAAKAAEMRCIAVMT 268
Query: 709 PLQKDEEISDLPDITIDNVTEL 774
L++D P + N+ ++
Sbjct: 269 TLEEDALQQASPSLIRKNIGDI 290
>09_04_0073 -
14333096-14333290,14333377-14333638,14333811-14333965,
14334039-14334147,14335094-14335131
Length = 252
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +1
Query: 454 YLLGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNC 633
Y +TN P I LGL +F V+V G+ KP + +A K L V +
Sbjct: 125 YKRAAVTNAPRINSELMISLLGLTDFFQAVIVGGECEKPKPAPFPYLKALKELQVSADHT 184
Query: 634 IMVGD 648
+ D
Sbjct: 185 FIFED 189
>08_02_1458 - 27270834-27271320,27271752-27271961,27272627-27273624,
27274099-27274195,27274278-27274393,27274465-27274590,
27275123-27275233,27275347-27275428,27275844-27275989,
27276457-27276650,27277277-27277388,27277869-27278001,
27278295-27278437,27278488-27278562,27278830-27278937,
27279072-27279197,27279752-27279836,27280358-27280440,
27280545-27280625,27280709-27280789,27281960-27282034,
27282112-27282498,27282902-27283036
Length = 1396
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -3
Query: 671 PLISVSSLSPTIMQLRGSTLRSLHAS----WKMC*SGFSQGRSPDTRTQSKYLRSPRRS 507
PLIS++ SP++ Q R T H S + +G D RT + LRS RRS
Sbjct: 1295 PLISLAHASPSMKQNRADTTPRSHTFEPGYHSSSGSQYDEGYEGDRRTGERQLRSMRRS 1353
>03_05_0042 +
20180151-20180468,20181595-20181665,20182929-20183087,
20183598-20183664,20183913-20184008,20184687-20184733,
20185113-20185193,20185704-20185806,20185967-20186028,
20187188-20187302,20193191-20195087,20195206-20195492
Length = 1100
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 544 LVSGDL-PWEKPDQHIFHEACKLLNVEPRNCIMVGD 648
+ +GD+ P +KPD I+ A L V+P +C++V D
Sbjct: 224 IFAGDVVPRKKPDPAIYLLAATTLGVDPSSCVVVED 259
>09_02_0119 -
4481522-4481580,4481615-4481718,4483132-4483231,
4483307-4483404,4483688-4483828,4485736-4485788,
4486578-4486649,4487730-4487801,4487895-4487987,
4489040-4489107,4489268-4489358
Length = 316
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 571 KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGK 678
KP + K N+E MVGD+L+TDI G+
Sbjct: 251 KPSSFLMDFLLKSFNLETSRMCMVGDRLDTDILFGQ 286
>06_03_0803 +
24737115-24737366,24738921-24739004,24739152-24739255,
24739321-24739445,24739549-24739707,24740120-24740237,
24740317-24740851,24740948-24741042,24741153-24741431,
24741478-24741592,24741669-24741855,24741934-24742490
Length = 869
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -3
Query: 818 FVDRLSLGEFGKTS-GSSVTLSIVMSGRSDISSSFCNGIQTVAASSA--SFPPLISVSS 651
F D +S+G F TS G V S +GR +++ I TVAA + SFP I +++
Sbjct: 396 FTDAISIGSFHATSNGILVVSSAGNAGRKGSATNLAPWILTVAAGTTDRSFPSYIRLAN 454
>08_01_1050 - 10649434-10651917
Length = 827
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 761 LSIVMSGRSDISSSFCNGIQTVAASSASFPPLISVSSLSPTIMQLRGSTLRSLHASWKM 585
L V+SG +++SS +G + PL+S+S L+ + +LRGS + + H K+
Sbjct: 172 LGTVISGWTNLSSMDLSG-NALDGDLPDLSPLLSLSYLNLSGNRLRGSVIGAFHEQMKV 229
>06_01_0066 - 554637-555548
Length = 303
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 469 ITNGPSRAQWQKIERLGLRKYFDCVLVSGD-LPWEKPDQHIFHEACKLLNVEPRNCIMVG 645
+TN P I LGL +F ++ + D KP + A LL PR+ ++
Sbjct: 178 VTNAPRANADLMISILGLSDFFQVIVAAADDCDLPKPSPEPYLRALSLLGASPRHTLVFE 237
Query: 646 DKL 654
D +
Sbjct: 238 DSV 240
>07_03_1763 - 29316969-29318120
Length = 383
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 196 CCKMNMAFPKTWLWRAVPHSYAPSGPRPDDESYALH 303
C + ++ K W W++VP S P G + SYA+H
Sbjct: 161 CTERHLPRVKEWTWKSVP-SQPPYGRLDEIVSYAVH 195
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 66 NKLWQIVDILTKIVMFLAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESG 245
+ +W IVD LTK+ F+ ++T G K + + +G+PK + + G
Sbjct: 1158 DSIWVIVDRLTKVARFIP---------VKTTYGGNKLAELYFARIVSLHGVPKKIVSDRG 1208
Query: 246 STFLRAF 266
S F F
Sbjct: 1209 SQFTSHF 1215
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 66 NKLWQIVDILTKIVMFLAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESG 245
+ +W +VD LTK+ F+ ++T G K + + +G+PK + + G
Sbjct: 356 DSIWVVVDRLTKVARFIP---------VKTTYGGNKLAELYFARIVSLHGVPKKIVSDRG 406
Query: 246 STFLRAF 266
S F F
Sbjct: 407 SQFTSHF 413
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 66 NKLWQIVDILTKIVMFLAILFDLDNTLIQTRKGDTKACNKLVELLQNEYGLPKDMAVESG 245
+ +W +VD LTK+ F+ ++T G K + + +G+PK + + G
Sbjct: 775 DSIWVVVDRLTKVARFIP---------VKTTYGGNKLAELYFARIVSLHGVPKKIVSDRG 825
Query: 246 STFLRAF 266
S F F
Sbjct: 826 SQFTSHF 832
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 33 LKIWILHFCLRNKLWQIVDILTKIVMFLAILFDLDNTLIQTRKGDTKACNKLVE 194
L I+ L L + I++ + + + +LFDLD+TL G AC K ++
Sbjct: 381 LPIFALEIILSFYKFLIMEAIVEGSKYECLLFDLDDTLYPFSSGINLACRKNIQ 434
>01_04_0082 + 15835137-15836312
Length = 391
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 581 NTSSTKHANFLTLSPVTALWLEI 649
NTSS ANF+ +P T W+E+
Sbjct: 113 NTSSPSVANFVVCNPATRQWMEL 135
>12_01_0092 + 726892-727247,727338-727347
Length = 121
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 782 TSGSSVTLSIVMSGRSDISSSFCNGIQTVAASSAS 678
TS + LS VM S SSS C+G++T+ ++S
Sbjct: 36 TSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASS 70
>11_01_0092 + 683869-684224,684315-684324
Length = 121
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 782 TSGSSVTLSIVMSGRSDISSSFCNGIQTVAASSAS 678
TS + LS VM S SSS C+G++T+ ++S
Sbjct: 36 TSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASS 70
>09_04_0688 +
19475847-19477034,19477133-19477384,19477778-19477858,
19477907-19478072,19479009-19479445,19479781-19479837
Length = 726
Score = 28.3 bits (60), Expect = 8.8
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = -3
Query: 785 KTSGSSVTLSIVMSGRSDIS-SSFCNGIQTVAASSASF--PPLISVSSLSPTIM---QLR 624
K SGS+ T ++ R S +++VA A PPL+++S L PT M
Sbjct: 234 KFSGSTFTDGPLLESRESFPCSDHLEALESVAVPLAKLAHPPLLNLSPLGPTWMHGTNTV 293
Query: 623 GSTLRSLHASWKMC*SGFSQG 561
GS SL + G+S+G
Sbjct: 294 GSHGESLRETEGSTCEGYSEG 314
>03_06_0300 +
32967935-32968029,32968975-32969077,32969175-32969244,
32969464-32969581,32969687-32969744,32969831-32969895,
32969990-32969996,32970087-32970147,32970757-32970776,
32970858-32970923,32971126-32971293,32971372-32971629,
32972098-32972310,32972824-32973099
Length = 525
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 621 LNVKKFACFVEDVLIRFLPGQVPGYEDAVEVFAK 520
LN K+F F++ +L G++P VE+F K
Sbjct: 266 LNGKEFVSFLQQILEALNKGEIPSTGSLVEIFNK 299
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,661,618
Number of Sequences: 37544
Number of extensions: 545720
Number of successful extensions: 1605
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -