Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_N16
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    25   0.94 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   5.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.6  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   8.7  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    22   8.7  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 288 FVIRSRP*RRVGMWNRSPQPCLWEGHIHFAAV 193
           F+I   P   V +W+     C+W+  I FAAV
Sbjct: 344 FIICWLPFFVVNLWSGFCSQCIWQEKIVFAAV 375


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 509 NASGFANTSTASSYPGTCPGRNLINTSSTKHANFLTLSPVT 631
           N S  A TST+ SYPG   G +   + S+  + F ++SP +
Sbjct: 70  NDSAAAITSTSPSYPG---GGSSSPSPSSPSSFFSSVSPTS 107


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = +2

Query: 473 RTDHRELNGRKSNASGF----ANTSTASSYPGTCPGRNLINTSSTKHAN 607
           +++H E  G++  A+ F     N+ + +     CPG  +  +  T+H N
Sbjct: 779 KSEHCE-KGKEYYAASFHTDIGNSQSLAHQDQCCPGFTMTKSGKTRHQN 826


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -3

Query: 332 QLRHRCAGHSCNAYDSSSGRGPEGA*EC 249
           + +H    HSC A  + S     G  EC
Sbjct: 269 KFKHEAGSHSCEACPAHSKSSDYGFTEC 296


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 238 RAVPHSYAPSGPRPDD 285
           R   H YA + P PDD
Sbjct: 18  REAEHGYASTMPMPDD 33


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 579 IRFLPGQVPGYEDAVEVFAKPEAFDFLP 496
           + F PG  P  ED+  V      + F+P
Sbjct: 49  VLFPPGPPPNNEDSSGVIVGASGYGFVP 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,054
Number of Sequences: 438
Number of extensions: 5777
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)