Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_N09
         (944 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0602 - 4788483-4788659,4789106-4789174,4789265-4789742,479...    29   4.1  

>11_01_0602 -
           4788483-4788659,4789106-4789174,4789265-4789742,
           4791348-4791892
          Length = 422

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 174 DSAHXVISTAPLVS*RPRSNLHKLTSELRKDPILRLRSGAGXE 302
           D+AH V   A +VS  P  N+ +L     +  +L + +GAG E
Sbjct: 25  DAAHRVDGRAEVVSPAPGGNIGRLDRSSTEPELLDIHAGAGEE 67


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,976,965
Number of Sequences: 37544
Number of extensions: 223505
Number of successful extensions: 663
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)