Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_N06
(945 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.014
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.014
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.014
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.69
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.69
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.69
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 31 0.91
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 4.8
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 4.8
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 6.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.014
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 349 GGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP + PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 34.7 bits (76), Expect = 0.097
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 346 GGGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 346 GGGXPPP--PKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPP P G PPPP PPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Frame = +1
Query: 349 GGXPPPPKXX----G*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP PPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.014
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 349 GGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP + PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 34.7 bits (76), Expect = 0.097
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 346 GGGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 346 GGGXPPP--PKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPP P G PPPP PPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Frame = +1
Query: 349 GGXPPPPKXX----G*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP PPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.014
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 349 GGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP + PPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 34.7 bits (76), Expect = 0.097
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 346 GGGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP PPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 346 GGGXPPP--PKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPP P G PPPP PPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Frame = +1
Query: 349 GGXPPPPKXX----G*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP PPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.69
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 349 GGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP G PPPP + PPPP
Sbjct: 92 GGIPPPPPMMGGIPPPPP-----MFGAPPPPPP 119
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 343 GGGGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
G GG PPPP PPPP PPPP
Sbjct: 79 GPGGIPPPPPMFAGGIPPPP----PMMGGIPPPPP 109
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.69
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +1
Query: 331 FFXXGGGGXPPPP----KXXG*XSPPPPXXKKXXWXXXXPPPP 447
F G GG PPPP + G PPPP PPPP
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 358 PPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
PP P G PPP W PPPP
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 362 PPQKXXVXNPPPPXXXKXXGGGGXPPP 442
PP + PPPP G GG PPP
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPP 336
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.69
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +1
Query: 331 FFXXGGGGXPPPP----KXXG*XSPPPPXXKKXXWXXXXPPPP 447
F G GG PPPP + G PPPP PPPP
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 358 PPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
PP P G PPP W PPPP
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 362 PPQKXXVXNPPPPXXXKXXGGGGXPPP 442
PP + PPPP G GG PPP
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPP 346
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 359 PPPQKXXVXNPPPPXXXKXXGGGGXPPP 442
PPP+ PPPP GG G PPP
Sbjct: 772 PPPRGGMHHMPPPPSFRGGRGGHGGPPP 799
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 358 PPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
PPPP+ PPPP + PPPP
Sbjct: 771 PPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 352 GXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
G PP P G PPP + PPPP
Sbjct: 714 GYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 31.5 bits (68), Expect = 0.91
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 538 FFFFSXLGXXGGGGVXFFFFX*XXXPPPPPP 630
FF LG GGGG FF PPPPP
Sbjct: 206 FFLNGGLGGTGGGGNNGFFVPVPVVIPPPPP 236
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 346 GGGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
G G PPPP G SPPPP PPP
Sbjct: 251 GSGSPPPPPAAG--SPPPPRTGSPPPPPTGSPPP 282
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 349 GGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP+ SPPPP + PPP
Sbjct: 286 GGSPPPPRA---GSPPPPPPPRGSPPTGSLPPP 315
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 356 APPPQKXXVXNPPPPXXXKXXGGGGXPPP 442
+PPP + PPP GG PPP
Sbjct: 263 SPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 346 GGGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
G G PPPP G SPPPP PPP
Sbjct: 272 GSGSPPPPPAAG--SPPPPRTGSPPPPPTGSPPP 303
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 349 GGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP+ SPPPP + PPP
Sbjct: 307 GGSPPPPRA---GSPPPPPPPRGSPPTGSLPPP 336
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 356 APPPQKXXVXNPPPPXXXKXXGGGGXPPP 442
+PPP + PPP GG PPP
Sbjct: 284 SPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 346 GGGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
G G PPPP G SPPPP PPP
Sbjct: 257 GSGSPPPPPAAG--SPPPPRTGSPPPPPTGSPPP 288
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 349 GGXPPPPKXXG*XSPPPPXXKKXXWXXXXPPPP 447
GG PPPP+ SPPPP + PPP
Sbjct: 292 GGSPPPPRA---GSPPPPPPPRGSPPTGSLPPP 321
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 356 APPPQKXXVXNPPPPXXXKXXGGGGXPPP 442
+PPP + PPP GG PPP
Sbjct: 269 SPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 441 GGGXPPPPXFFXXXGGGGXLTXXFWGGGA 355
GG PPP GGGG T ++G G+
Sbjct: 278 GGAPPPPSGSAMGGGGGGGATSAYFGVGS 306
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 441 GGGXPPPPXFFXXXGGGGXLTXXFWGGGA 355
GG PPP GGGG T ++G G+
Sbjct: 172 GGAPPPPSGSAMGGGGGGGATSAYFGVGS 200
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 343 GGGGXPPPPKXXG*XSPPPP 402
GG PPPPK PPPP
Sbjct: 24 GGKKKPPPPKSASKMGPPPP 43
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 343 GGGGXPPPPKXXG*XSPPPP 402
GG PPPPK PPPP
Sbjct: 24 GGKKKPPPPKSASKMGPPPP 43
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 389 PPPPXXXKXXGGGGXPPP 442
PPPP K GG PPP
Sbjct: 123 PPPPPPRKSRAGGSSPPP 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,312,441
Number of Sequences: 27780
Number of extensions: 183799
Number of successful extensions: 1918
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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