Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_N03
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 30 1.9
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 30 1.9
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 30 1.9
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 29 4.3
Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p... 29 5.7
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF125455-2|AAP13747.2| 431|Caenorhabditis elegans Hypothetical ... 29 5.7
AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E... 29 5.7
AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p4... 28 9.9
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 636 LINPEAAAKYGIHKENDYFVYKANYSNAVLYNNEE 740
+++P IHKE F YK+N A+LY E
Sbjct: 227 VLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRE 261
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 636 LINPEAAAKYGIHKENDYFVYKANYSNAVLYNNEE 740
+++P IHKE F YK+N A+LY E
Sbjct: 211 VLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRE 245
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 636 LINPEAAAKYGIHKENDYFVYKANYSNAVLYNNEE 740
+++P IHKE F YK+N A+LY E
Sbjct: 208 VLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRE 242
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 160 WMPVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRT 336
W P+ ++ L+ +D L + +EY I + D+ N + N+ A E L++ +T
Sbjct: 385 WQPLPFPGYEEYLNIKEDCDNLPSHEEYKTIREACDVFPNYTEFINRVANYEMLEIGKT 443
>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
protein Y49E10.11b protein.
Length = 1089
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +1
Query: 163 MPVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTGF 342
+P+ ++ +++ FFQ + +N D E Y + D N + +F+ +TG
Sbjct: 334 IPISLQVTLEVVRFFQAI-YINNDIEMYDVNSDSCAIARTSNLNEELGQVKFIMSDKTGT 392
Query: 343 MPKNL 357
+ +N+
Sbjct: 393 LTRNV 397
>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
protein Y49E10.11a protein.
Length = 1139
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +1
Query: 163 MPVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTGF 342
+P+ ++ +++ FFQ + +N D E Y + D N + +F+ +TG
Sbjct: 334 IPISLQVTLEVVRFFQAI-YINNDIEMYDVNSDSCAIARTSNLNEELGQVKFIMSDKTGT 392
Query: 343 MPKNL 357
+ +N+
Sbjct: 393 LTRNV 397
>AF125455-2|AAP13747.2| 431|Caenorhabditis elegans Hypothetical
protein Y48A5A.1 protein.
Length = 431
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 11 ITXSL*GILKIFXFASRLETMKSCLDSGWACSRRAQQCSTKTEHHKVKKC 160
I SL I+ + + R+ +S +SGW C++ + S + VK+C
Sbjct: 256 IMTSLIDIVFGYCYDQRVNDWESACESGWNCAKLSPSLSFFAKFSSVKEC 305
>AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E2
ATPase protein.
Length = 815
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +1
Query: 163 MPVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTGF 342
+P+ ++ +++ FFQ + +N D E Y + D N + +F+ +TG
Sbjct: 10 IPISLQVTLEVVRFFQAI-YINNDIEMYDVNSDSCAIARTSNLNEELGQVKFIMSDKTGT 68
Query: 343 MPKNL 357
+ +N+
Sbjct: 69 LTRNV 73
>AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p450
family protein 34A6 protein.
Length = 498
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 199 SFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEF 318
+F +S ++TDDE +K K+++ E M+N +K + F
Sbjct: 397 AFATQLSAMHTDDETFKNHKEFNPERFMENNNLEKKLIPF 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,130,557
Number of Sequences: 27780
Number of extensions: 367959
Number of successful extensions: 948
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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