Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_M23
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.022
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.022
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.039
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.052
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.052
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.052
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.36
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.36
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.84
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 1.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 1.9
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.6
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 2.6
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 4.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 5.9
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.8
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 7.8
AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical... 28 7.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPP----XGXXXXXXXPPPPXKXXFCWFFXX 665
PPP G PPPP Y PPPP PPPP +
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 379
Query: 666 XXPPPP 683
PPPP
Sbjct: 380 MIPPPP 385
Score = 35.5 bits (78), Expect = 0.052
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPP---XGXXXXXXXPPPPXKXXFCWFFXXX 668
PPP G PPPP + PPPP G PPPP F
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGM-WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
Query: 669 XPPPP 683
PPPP
Sbjct: 333 MPPPP 337
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +3
Query: 501 PPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXXXXPPP 680
PP PPP PPPP PPPP + PPP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 681 P 683
P
Sbjct: 321 P 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPP----XGXXXXXXXPPPPXKXXFCWFFXX 665
PPP G PPPP Y PPPP PPPP +
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 389
Query: 666 XXPPPP 683
PPPP
Sbjct: 390 MIPPPP 395
Score = 35.5 bits (78), Expect = 0.052
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPP---XGXXXXXXXPPPPXKXXFCWFFXXX 668
PPP G PPPP + PPPP G PPPP F
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGM-WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
Query: 669 XPPPP 683
PPPP
Sbjct: 343 MPPPP 347
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +3
Query: 501 PPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXXXXPPP 680
PP PPP PPPP PPPP + PPP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 681 P 683
P
Sbjct: 331 P 331
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.9 bits (79), Expect = 0.039
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGG P GGGGG GGGGG GGG G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGG P GGGGG GGGGG GGG G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGC-------GGGGGCAPPPAPCGGGCG 84
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 632 GGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGGG GGGGG GGG G
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -1
Query: 632 GGGGGXXXXXXPXGGG-GGXXXIXKXXGGGXG 540
GGGGG P GGG GG GGG G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCG 98
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.9 bits (79), Expect = 0.039
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGG P GGGGG GGGGG GGG G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGG P GGGGG GGGGG GGG G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGC-------GGGGGCAPPPAPCGGGCG 84
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 632 GGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGGG GGGGG GGG G
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -1
Query: 632 GGGGGXXXXXXPXGGG-GGXXXIXKXXGGGXG 540
GGGGG P GGG GG GGG G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCG 98
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.052
Identities = 24/81 (29%), Positives = 24/81 (29%), Gaps = 2/81 (2%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPP--XXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXXXX 671
PPP G PPPP PPPP G PPPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-----GGCP 769
Query: 672 PPPPXXKXXFFXXXXXXXXPP 734
PPPP F PP
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXG 599
PPP GG PPPP PPPP G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXF 647
PPP PPPP PPPP PPPP F
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +3
Query: 540 PPPPXXXFXYXXXXPPPPXG--XXXXXXXPPPPXKXXFCWFFXXXXPPPP 683
PPPP PPPP G PPPP PPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 582 PPPPXGXXXXXXXPPPPXKXXFCWFFXXXXPPPP 683
PPPP G PPPP PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.052
Identities = 24/81 (29%), Positives = 24/81 (29%), Gaps = 2/81 (2%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPP--XXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXXXX 671
PPP G PPPP PPPP G PPPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-----GGCP 769
Query: 672 PPPPXXKXXFFXXXXXXXXPP 734
PPPP F PP
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXG 599
PPP GG PPPP PPPP G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXF 647
PPP PPPP PPPP PPPP F
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +3
Query: 540 PPPPXXXFXYXXXXPPPPXG--XXXXXXXPPPPXKXXFCWFFXXXXPPPP 683
PPPP PPPP G PPPP PPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 582 PPPPXGXXXXXXXPPPPXKXXFCWFFXXXXPPPP 683
PPPP G PPPP PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.052
Identities = 24/81 (29%), Positives = 24/81 (29%), Gaps = 2/81 (2%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPP--XXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXXXX 671
PPP G PPPP PPPP G PPPP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-----GGCP 352
Query: 672 PPPPXXKXXFFXXXXXXXXPP 734
PPPP F PP
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPP 373
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXG 599
PPP GG PPPP PPPP G
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXF 647
PPP PPPP PPPP PPPP F
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +3
Query: 540 PPPPXXXFXYXXXXPPPPXG--XXXXXXXPPPPXKXXFCWFFXXXXPPPP 683
PPPP PPPP G PPPP PPPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 582 PPPPXGXXXXXXXPPPPXKXXFCWFFXXXXPPPP 683
PPPP G PPPP PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGG 546
GGGG + + GGGGG GGGGG GGG
Sbjct: 218 GGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGG 263
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 632 GGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGGG GGGGG GGG G
Sbjct: 222 GGGGGYGSGGGWGGGGGGRDRDRGGWGGGGG 252
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXGXXF 531
GGGG GGGGG GGGG GGG G +
Sbjct: 217 GGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGY 267
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPP--XGXXXXXXXPPPP 632
PP G + PPPP + PPPP G PPPP
Sbjct: 728 PPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPP 774
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXXXXPP 677
PPP G PPPP PPPP G P P F F PP
Sbjct: 707 PPPPGIP--GYPPAPPPPGVG-------PPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPP 757
Query: 678 PP 683
PP
Sbjct: 758 PP 759
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPP 632
PPP G PPP + PP G PPPP
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.84
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXG 599
PPP G PPPP PPPP G
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 540 PPPPXXXFXYXXXXPPPPXGXXXXXXXPPPP 632
PPPP PPPP PPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 540 PPPPXXXFXYXXXXPPPPXGXXXXXXXPPPP 632
PPPP PPPP PPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 540 PPPPXXXFXYXXXXPPPPXGXXXXXXXPPPP 632
PPPP PPPP PPPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 540 PPPPXXXFXYXXXXPPPPXGXXXXXXXPPPP 632
PPPP PPPP PPPP
Sbjct: 72 PPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 540 PPPPXXXFXYXXXXPPPPXGXXXXXXXPPPP 632
PPPP PPPP PPPP
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGG GGGGG GG GG GGG G
Sbjct: 322 GGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGG 369
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GG G + GGGGG GGGGG GGG G
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRG 129
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFF--XXXX 671
PPP G + PPP + PPP G PPPP + W
Sbjct: 25 PPPDWFFPGPLRPWGPPPP----WHRNRGPPPFGPPPPWDRPPPPWRRP-PWHRRPPWGL 79
Query: 672 PPPP 683
PPPP
Sbjct: 80 PPPP 83
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXK---XXGGGXGXXFFPP 522
GGGG + F GGGG GGGG + GGG G + P
Sbjct: 229 GGGGGRRGSPDRRGGFRSGGGGGGYMRSGGGGGGPDRRDHRDNDRNGGGGGHRPYDP 285
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 632 GGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGGG GGGGG GGG G
Sbjct: 67 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 97
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 632 GGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGGG GGGGG GGG G
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 104
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 632 GGGGGXXXXXXPXGGGGGXXXIXKXXGGGXGXXFFPP 522
GGGGG GGGGG GGG G PP
Sbjct: 80 GGGGGCGGGGGGCGGGGGGC----GGGGGCGGGCAPP 112
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGG P GGGGG GGGGG GGG G
Sbjct: 106 GGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG---GGGGGCG 150
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGG 579
GGG + PT GGGGG GGGGG
Sbjct: 251 GGGNQNRQQVPTNPM--GGGGGYPQPPPQQGGGGG 283
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXG 599
PP GG PPPP Y PPPP G
Sbjct: 36 PPACGNPCGGGFGPPPPPFGPVGY-ALPPPPPNG 68
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 4/66 (6%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXP----PPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXX 665
PPP G P PPP PPPP P + C
Sbjct: 92 PPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENPCCQIVAA 151
Query: 666 XXPPPP 683
PPPP
Sbjct: 152 AMPPPP 157
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -1
Query: 683 GGGGXXXXK-KPTKXXFXGGGGGXXXXXXP-XGGGGGXXXIXKXXGGG 546
GGGG + P GGGGG P GGG G GGG
Sbjct: 43 GGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGGCGGGVAPAPIGGG 90
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPP 593
PPP GG PPPP PPP
Sbjct: 126 PPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPP 157
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXGXXF 531
GG G F GGGGG GGGGG GGG G +
Sbjct: 36 GGAGGDILGGLASNFFGGGGGGGG-----GGGGGGFGGGNGGFGGGGGGNY 81
>AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical
protein Y38E10A.17 protein.
Length = 586
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -1
Query: 683 GGGGXXXXKKPTKXXFXGGGGGXXXXXXPXGGGGGXXXIXKXXGGGXG 540
GGGG + GG P GGGGG GGG G
Sbjct: 429 GGGGSSAEVRSVGFGAQQFGGSQFARPIPAGGGGGGSGGYGAGGGGSG 476
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXXXXPP 677
PPP GG PPPP PPPP G PPP PP
Sbjct: 280 PPPPPA--GGS---PPPPRAG---SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 678 PPXXK 692
PP K
Sbjct: 332 PPRQK 336
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXXXXPP 677
PPP GG PPPP PPPP G PPP PP
Sbjct: 301 PPPPPA--GGS---PPPPRAG---SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 678 PPXXK 692
PP K
Sbjct: 353 PPRQK 357
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +3
Query: 498 PPPXXXXXGGEKXXPPPPXXXFXYXXXXPPPPXGXXXXXXXPPPPXKXXFCWFFXXXXPP 677
PPP GG PPPP PPPP G PPP PP
Sbjct: 286 PPPPPA--GGS---PPPPRAG---SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 678 PPXXK 692
PP K
Sbjct: 338 PPRQK 342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,232,145
Number of Sequences: 27780
Number of extensions: 235061
Number of successful extensions: 1949
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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