Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_M22
         (901 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    26   0.54 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   5.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   5.0  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 653 IPLVDVPASAGDRKHVYNQAF 715
           +P+VD P S G+  ++YN  F
Sbjct: 309 LPMVDNPESTGNLVYIYNNPF 329


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 616 CWRCCSLQFPGDDPTGG 666
           CW C +L  PG    GG
Sbjct: 13  CWCCDNLGGPGSSSAGG 29


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 263 LVSSIQLVVLESTYCPSIYSFVVGAELLYERRSTSWDS 150
           ++S+   V L ++   SIYSF+    L++   S  W S
Sbjct: 461 ILSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQWSS 498


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 263 LVSSIQLVVLESTYCPSIYSFVVGAELLYERRSTSWDS 150
           ++S+   V L ++   SIYSF+    L++   S  W S
Sbjct: 499 ILSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQWSS 536


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,249
Number of Sequences: 438
Number of extensions: 5208
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)