Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_M21
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0845 - 20968051-20968188,20968769-20968843,20969399-209694...    29   6.8  
02_05_0154 - 26330109-26330189,26330274-26330411,26330518-263306...    29   6.8  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    28   9.0  
07_01_0080 + 587674-588510                                             28   9.0  

>10_08_0845 -
           20968051-20968188,20968769-20968843,20969399-20969425,
           20969512-20969649,20969765-20969880,20970000-20970081,
           20970105-20970226,20970314-20970368
          Length = 250

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 118 SLMFEILKPCHCHLN*VNN 62
           + +FE+ KPC+C+L  VNN
Sbjct: 16  TFLFELDKPCYCNLKVVNN 34


>02_05_0154 -
           26330109-26330189,26330274-26330411,26330518-26330633,
           26330782-26330863,26332706-26332770,26333016-26333112,
           26334066-26334136,26334242-26334304,26334379-26334431,
           26335143-26335192,26336295-26336340,26337014-26337019,
           26337381-26337511,26337594-26337680,26338472-26338849
          Length = 487

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 118 SLMFEILKPCHCHLN*VNN 62
           + +FE+ KPC+C+L  VNN
Sbjct: 269 TFLFELDKPCYCNLKVVNN 287


>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
            257038-257169,257297-258589,259133-259837,260465-260549,
            260604-260650,260810-260900,261838-262101,262195-262309,
            262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 760  PPXXPPXXXWGGGPQXXPPPXFPPXN 837
            PP  PP    GG P   PPP   P N
Sbjct: 929  PPPPPPPGKPGGPPPPPPPPGSLPRN 954


>07_01_0080 + 587674-588510
          Length = 278

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +1

Query: 760 PPXXPPXXXWGGGPQXXPPPXFPP 831
           PP  PP     G P   PPP  PP
Sbjct: 91  PPPPPPPPPSSGSPPPPPPPPPPP 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,338,953
Number of Sequences: 37544
Number of extensions: 344987
Number of successful extensions: 918
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)