Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_M21
         (915 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC090886-1|AAH90886.1|  400|Homo sapiens chromosome 1 open readi...    31   4.4  
AL133320-3|CAI21782.1|  400|Homo sapiens chromosome 1 open readi...    31   4.4  
AL133320-2|CAI21783.1|  281|Homo sapiens chromosome 1 open readi...    31   4.4  
AF492646-1|AAO85488.1|  546|Homo sapiens proline rich, vinculin ...    31   7.7  

>BC090886-1|AAH90886.1|  400|Homo sapiens chromosome 1 open reading
           frame 141 protein.
          Length = 400

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 43  DFELACDYLLNLGDSDTVSKFRTSKNRQITKVINNVSFKC 162
           DF+L  +  L    S  +SK +  K+  ITK   +VSFKC
Sbjct: 45  DFQLEFEEALATSASKAISKIKEDKSCSITKSKMHVSFKC 84


>AL133320-3|CAI21782.1|  400|Homo sapiens chromosome 1 open reading
           frame 141 protein.
          Length = 400

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 43  DFELACDYLLNLGDSDTVSKFRTSKNRQITKVINNVSFKC 162
           DF+L  +  L    S  +SK +  K+  ITK   +VSFKC
Sbjct: 45  DFQLEFEEALATSASKAISKIKEDKSCSITKSKMHVSFKC 84


>AL133320-2|CAI21783.1|  281|Homo sapiens chromosome 1 open reading
           frame 141 protein.
          Length = 281

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 43  DFELACDYLLNLGDSDTVSKFRTSKNRQITKVINNVSFKC 162
           DF+L  +  L    S  +SK +  K+  ITK   +VSFKC
Sbjct: 45  DFQLEFEEALATSASKAISKIKEDKSCSITKSKMHVSFKC 84


>AF492646-1|AAO85488.1|  546|Homo sapiens proline rich, vinculin and
           TIR domain containing protein-B protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 772 PPXXXWGGGPQXXPPPXFP 828
           PP   W G PQ  PPP FP
Sbjct: 480 PPFPTWPGCPQPPPPPAFP 498


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,698,675
Number of Sequences: 237096
Number of extensions: 1936224
Number of successful extensions: 4610
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4383
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)