Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_M19
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    29   0.25 
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    28   0.43 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.3  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    24   7.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   7.1  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   9.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.3  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 417 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQ-QSLL 566
           Q  +Q+   RPQ  RP + +    R  QR+  +  L+EV P  G+  +SLL
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLL 513



 Score = 24.6 bits (51), Expect = 4.0
 Identities = 24/106 (22%), Positives = 40/106 (37%)
 Frame = +3

Query: 273 QGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQKGPSRPQ 452
           QG R    + RQ+     R     +  +  +Q      V   L +   Q   Q+   + Q
Sbjct: 260 QGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQ 319

Query: 453 VDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDHVHRGQ 590
             R  + +Q   +  QRQ QQ+   +   +  +QQ   Q   H+ Q
Sbjct: 320 QQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQ 365


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 140 LTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 235
           L P  HQE MT WR     +      RP +P+
Sbjct: 100 LAPMSHQETMTLWREVAAALDGKAKCRPRTPS 131


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = -2

Query: 219  LVFTNDDTHIQLLR---QYVISSWCKCGVRSQRTHGEDEGKQSQSHLGAVVIFESKSTNT 49
            LV  N+   +QL      +++S+WC   +    TH  D  K S +    + I  S+S  +
Sbjct: 1408 LVNLNNQKRVQLTGAKVHHIMSNWCYAEMTIDTTHTADGSKLSFN----ITIKPSESHTS 1463

Query: 48   VKILRIPYS 22
            + +  + +S
Sbjct: 1464 IDVDHVRFS 1472


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 224 AVSYSPMTTLIYSCSASTSSVLGASVA 144
           A+S SP++   +  SASTS+   ASV+
Sbjct: 87  ALSLSPVSVSKFDTSASTSNSSNASVS 113


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 608 ITRKVLXMTVSSTVIAPLTPSNTTGTLSPP 697
           I  +V+  T SS+   PLTP+   G ++PP
Sbjct: 451 IGSRVIQRTPSSS--PPLTPNTICGLIAPP 478


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 147 GVRSQRTHGEDEGKQSQSH 91
           G+R +RT GED  K  Q H
Sbjct: 284 GIRGRRTDGEDLIKHWQHH 302


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 190 YMSVVIGEYETAIAKCSEYLKEKKGEV 270
           YM  +I + E    +C + LKEK  +V
Sbjct: 550 YMEAIIVDTEKTARRCIQILKEKMLDV 576


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 839,686
Number of Sequences: 2352
Number of extensions: 17616
Number of successful extensions: 58
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)