Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_M17
         (933 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0087 - 10520708-10520823,10521041-10521130,10521571-105219...    33   0.25 
01_05_0599 - 23550663-23550849,23553236-23553417                       30   2.3  
05_06_0195 + 26291126-26291316,26292432-26292618                       29   5.3  
04_04_1401 + 33279092-33279286,33280223-33280306,33280459-332805...    29   5.3  

>10_06_0087 -
           10520708-10520823,10521041-10521130,10521571-10521901,
           10522248-10522409,10522506-10522726,10523852-10524056
          Length = 374

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 246 LAPPKLSXLPQIXQGIGNLITSAKXGAWKRQ-TVKEATLNVLVGAEVIFWFYIGECIGKR 422
           L  P+ S  PQ  +   N I  +K G WK   TV+  T  V+VG +V    Y GE    +
Sbjct: 62  LIDPRNSDDPQSPKNGENAIIKSKTGYWKVVGTVRIPTSTVIVGMKVSLDHYEGEAPSGK 121

Query: 423 HLVWI 437
              W+
Sbjct: 122 RTGWV 126


>01_05_0599 - 23550663-23550849,23553236-23553417
          Length = 122

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 225 CNLLAFELAPPKLSXLPQIXQGIGNLITSAKXGAWK-RQTVKEATLNV--LVGAEVIFWF 395
           C  L+ +L   +L+ LP   +         K   WK R+ +K   L +  L G E+  WF
Sbjct: 47  CQELSKQLFYTRLASLPGRYEAFWKEFDGVKQ-VWKNRKELKVEDLGIVTLFGVELYAWF 105

Query: 396 YIGECIGK 419
            +GE +G+
Sbjct: 106 CVGEIVGR 113


>05_06_0195 + 26291126-26291316,26292432-26292618
          Length = 125

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +3

Query: 225 CNLLAFELAPPKLSXLPQIXQGIGNLITSAKXGAWKRQ---TVKEATLNVLVGAEVIFWF 395
           C  L+ +L   +L+ LP   +         K   W+ +    V+ A +  L G E+  WF
Sbjct: 50  CQELSKQLFYTRLASLPGRYEAFWKEADQVK-NLWRNRKDLNVEHAGVAALFGIELYAWF 108

Query: 396 YIGECIGK 419
            +GE +G+
Sbjct: 109 CVGEIVGR 116


>04_04_1401 +
           33279092-33279286,33280223-33280306,33280459-33280524,
           33280945-33281028,33281181-33281246,33281719-33281802,
           33281955-33282020,33282323-33282388,33282667-33282726,
           33282805-33282888,33282968-33283111,33283552-33283586,
           33283694-33283746,33283828-33283928,33284516-33284974
          Length = 548

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 813 GGGRFXYAEKPSPHLPPDLEHKMXAIXXXXLFIAAYNGYQ 694
           GGG       PSP  PP  +  +  +     F+ AY GY+
Sbjct: 26  GGGGGSPPSSPSPPSPPSPQPLLPTLPSPQAFVDAYTGYE 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,867,253
Number of Sequences: 37544
Number of extensions: 355183
Number of successful extensions: 546
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)