Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_M16
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    36   7e-04
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    36   7e-04
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.92 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   2.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.5  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   8.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   8.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   8.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   8.6  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 35.5 bits (78), Expect = 7e-04
 Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
 Frame = +2

Query: 275 PKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQV--------DAEKYKNVVNGFKVSVRE 430
           P  FA            + T V P++ VK  LQV        + ++YK +++ F    +E
Sbjct: 7   PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66

Query: 431 EGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASA 607
           +G     +G     I Y       F F + +K  + G +D  T +  R FV   AS  A
Sbjct: 67  QGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQF-LRYFVGNLASGGA 124


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 35.5 bits (78), Expect = 7e-04
 Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
 Frame = +2

Query: 275 PKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQV--------DAEKYKNVVNGFKVSVRE 430
           P  FA            + T V P++ VK  LQV        + ++YK +++ F    +E
Sbjct: 7   PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66

Query: 431 EGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASA 607
           +G     +G     I Y       F F + +K  + G +D  T +  R FV   AS  A
Sbjct: 67  QGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQF-LRYFVGNLASGGA 124


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 363 HFTRSRGTTAVWVRPHDRTP 304
           HF  S G TA+W+ P +R+P
Sbjct: 58  HFIES-GITAIWLSPINRSP 76


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +2

Query: 11  ITTHYRESLRFDLCDRRGAVCSWLVNSIK 97
           IT+ Y+  +  D+CDR   + S L+N+++
Sbjct: 119 ITSAYK--IEIDMCDRLWVLDSGLINNVR 145


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 719 LDHLRPRXAEGARETRHGLD 660
           L+HLR   AEG  + ++ LD
Sbjct: 435 LNHLRANVAEGRNQRKNVLD 454


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 608 PPTQTPPGTRRYGK 567
           PP QTPP  +  G+
Sbjct: 395 PPRQTPPSRKESGR 408


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +3

Query: 702 WPKMVKNERLRHVLQ--GPG 755
           WP++  NE+  H L   GPG
Sbjct: 512 WPRLNPNEKSLHYLHIAGPG 531


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 165 GPRNGEFRAASSNEEN 118
           GPRNG+ +  SS  EN
Sbjct: 210 GPRNGKRKRKSSTIEN 225


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +3

Query: 702 WPKMVKNERLRHVLQ--GPG 755
           WP++  NE+  H L   GPG
Sbjct: 512 WPRLNPNEKSLHYLHIAGPG 531


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,162
Number of Sequences: 438
Number of extensions: 5365
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)