Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_M14
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   2.1  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   8.6  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   8.6  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 99  NARLLHYS*TYNSVFGRLER 158
           N   +HY+  Y+S++GR +R
Sbjct: 592 NQAAIHYNLPYSSLYGRFKR 611


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 470 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 375
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 470 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 375
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 470 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 375
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 470 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 375
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 470 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 375
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 470 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 375
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 470 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 375
           E NR Y K+HN K  + L    T+ N  SR R
Sbjct: 14  EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 156 RCNEPRVDVRKTGDFTIVSNGLAVSRG 236
           +CN+ + D+ +TG      +G   SRG
Sbjct: 67  QCNDKKTDIEETGRGKGRGHGKGGSRG 93


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 797 RQSLEYESPGQGLPSS 750
           R S EYE P  GLP S
Sbjct: 436 RFSGEYEIPAHGLPPS 451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,205
Number of Sequences: 438
Number of extensions: 4764
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)