Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_M13
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39997-1|AAA81096.1|  204|Caenorhabditis elegans Calexcitin prot...    56   3e-08
AY962814-1|AAX81435.1|  189|Caenorhabditis elegans calexcitin 2 ...    45   6e-05

>U39997-1|AAA81096.1|  204|Caenorhabditis elegans Calexcitin protein
           1 protein.
          Length = 204

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
 Frame = -2

Query: 643 DFELAIERISQSRGWSAGDAQYKEXXDTLLKVWDGLSS-ADTDNDGQVSXEXWISLWXKF 467
           DF L ++++    G  A   Q      +L  +W+GL S AD D D  +S + WI L  K 
Sbjct: 50  DFYLVVKKVRDIYG--AESVQTGFAKKSLAALWEGLCSIADADKDQLISIDEWIGLLKKT 107

Query: 466 SS-SPXDWQNLYCKFIFXLXDXSNDGSXDSXEXFSVXAXFGLDKAEAASAFXXXS 305
            + +   W   Y  F+F L D S DG  D  E     + +G D++E  +AF   S
Sbjct: 108 DAKTEPKWFKDYQNFMFKLFDVSCDGVMDLAEYTDGMSTYGFDQSECDAAFHKFS 162


>AY962814-1|AAX81435.1|  189|Caenorhabditis elegans calexcitin 2
           protein.
          Length = 189

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
 Frame = -2

Query: 646 KDFELAIERISQSRGWSAGDAQYKEXXDTLLKVWDGLSSA-DTDNDGQVSXEXWISLWXK 470
           KDF+  IE I + RG  +    +      L  +W  ++ A   + +  ++   WI L   
Sbjct: 35  KDFKDLIEVIGEVRGRRSDF--FMTARLCLPDIWQKMTEAIGKEEEDIITLSDWIQLCQS 92

Query: 469 FSSSPXD--WQNLYCKFIFXLXDXSNDGSXDSXEXFSVXAXFGLDKAEAAS-----AFXX 311
              S  +  WQ  Y +++F L D S D   D  E   V   FG+++ +++      AF  
Sbjct: 93  SRKSVREPAWQKAYVEYMFKLLDESGDHLVDQAEYVQVLGYFGVNRKDSSHCFDQFAFNH 152

Query: 310 XSQGXXXVSFAEXXXLFXEYXAXXXVXAPGNFVFG 206
             Q    +   +   L+ ++       +PGN++ G
Sbjct: 153 QGQLINSIDKKKFHVLWKQFFHSEDPSSPGNWLLG 187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,801,094
Number of Sequences: 27780
Number of extensions: 187643
Number of successful extensions: 390
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)