Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_M11
         (762 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060     29   5.3  
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325...    28   7.1  

>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
          Length = 794

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +1

Query: 457 PPPF*KXGXGXFFP-PXKXXKXPXPPPP 537
           PPPF + G G  +P   K    P PPPP
Sbjct: 16  PPPFGRGGGGAGYPRGHKQLYAPPPPPP 43


>09_06_0172 +
           21329904-21331512,21331595-21331740,21332333-21332556,
           21333689-21334448
          Length = 912

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
 Frame = -3

Query: 349 FWGGX--PPPXXXKKIFGGXFXGPXPPXPPKXKIW 251
           ++GG   PPP        G    P PP PP+   W
Sbjct: 323 YYGGASPPPPADIPSTSRGEVTPPAPPSPPRVSTW 357


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,178,964
Number of Sequences: 37544
Number of extensions: 257754
Number of successful extensions: 827
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)