Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_M05
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 203 2e-52
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 203 2e-52
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 155 6e-38
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 154 1e-37
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 140 1e-33
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 105 6e-23
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 103 2e-22
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 96 3e-20
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 83 3e-16
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 72 5e-13
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 30 2.0
AC006730-11|ABO16462.1| 327|Caenorhabditis elegans Hypothetical... 30 2.7
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 29 3.5
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 29 3.5
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 3.5
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 4.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 4.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 4.7
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 8.1
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 8.1
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 8.1
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 8.1
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 8.1
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 203 bits (495), Expect = 2e-52
Identities = 89/163 (54%), Positives = 116/163 (71%)
Frame = +3
Query: 126 NNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 305
N+G +IP GLGTW+SKPGEV A+K A+ GYRHIDCA+VY N+KEVGEA+ + EG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 306 VTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQ 485
V RE+LFITSK+WNTFH + L +L + Y+DL LIHWPQ Y E LFP +
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 486 SGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKV 614
+GK+++SDVDY++TWKA E K G +SIG+SNF Q+++V
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRV 170
Score = 44.4 bits (100), Expect = 1e-04
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 662 HPYLNQKRLKEFCXARGVXITAYSPLGSP 748
HPY Q +L+EFC +G+ + YSPLG+P
Sbjct: 186 HPYFTQVKLREFCKEKGIVVVGYSPLGNP 214
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 203 bits (495), Expect = 2e-52
Identities = 89/163 (54%), Positives = 116/163 (71%)
Frame = +3
Query: 126 NNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 305
N+G +IP GLGTW+SKPGEV A+K A+ GYRHIDCA+VY N+KEVGEA+ + EG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 306 VTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQ 485
V RE+LFITSK+WNTFH + L +L + Y+DL LIHWPQ Y E LFP +
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 486 SGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKV 614
+GK+++SDVDY++TWKA E K G +SIG+SNF Q+++V
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRV 170
Score = 44.4 bits (100), Expect = 1e-04
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 662 HPYLNQKRLKEFCXARGVXITAYSPLGSP 748
HPY Q +L+EFC +G+ + YSPLG+P
Sbjct: 186 HPYFTQVKLREFCKEKGIVVVGYSPLGNP 214
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 155 bits (375), Expect = 6e-38
Identities = 73/179 (40%), Positives = 117/179 (65%), Gaps = 2/179 (1%)
Frame = +3
Query: 117 VTFNNGETIPVFGLGTWKSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKI 293
+ N G +P+FGLGTW+ K E+T A++ A+D GYR ID A++Y NE +G+ + I
Sbjct: 6 IPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYI 65
Query: 294 KEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYK-EDGSL 470
G + RED+F+TSKL T H P+ V ++ L L ++Y+DLYLIH P +K ++GS
Sbjct: 66 SSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSF 125
Query: 471 FPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKVAAARDCQAGRQ 647
P ++G++ +++ ++DTW+A+E L KEG +K++GVSNF+ QL+ + A + + Q
Sbjct: 126 APLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPANQ 184
Score = 42.7 bits (96), Expect = 4e-04
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 656 KCHPYLNQKRLKEFCXARGVXITAYSPLGSPDRXWXXP 769
+CH Y Q+ L+ C GV +TAY+PLGSP R P
Sbjct: 187 ECHIYWPQQELRALCKKLGVTVTAYAPLGSPGRKAARP 224
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 154 bits (373), Expect = 1e-37
Identities = 72/176 (40%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Frame = +3
Query: 102 PKIPVVTFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAI 281
P VT N+G +PV G GTW+ + V+DA++ GYRHID A + N++EV I
Sbjct: 2 PIADTVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGI 61
Query: 282 TSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKED 461
K V RE+LF++SK+WNT+H + + E L+ Y+DL +IHWP + ED
Sbjct: 62 KDWCKIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAED 121
Query: 462 -----GSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKV 614
L+P +GK+++SDVDY++TWKA+E + G ++SIG++NFN Q+E+V
Sbjct: 122 EPPGERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQV 177
Score = 33.9 bits (74), Expect = 0.16
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +2
Query: 662 HPYLNQKRLKEFCXARGVXITAYSPLGSP 748
+P+L+Q+ +++FC +G+ +TA+ G+P
Sbjct: 193 NPFLDQEEIRQFCREKGIILTAFMLTGNP 221
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 142 bits (345), Expect = 2e-34
Identities = 74/168 (44%), Positives = 103/168 (61%)
Frame = +3
Query: 117 VTFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 296
+ +NG +PV GLGTW+S P EV AVK A+ GYR ID A VY NE+ +G AI ++
Sbjct: 8 IKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLE 67
Query: 297 EGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 476
EGVV RE+LFIT+K W P + G L+E+L L ++Y+DLYL H P A+ +
Sbjct: 68 EGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFND------ 121
Query: 477 TDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKVAA 620
D S I S V+ D W+ + + K GL K++GVSN+N+ Q+ + A
Sbjct: 122 -DMSEHIA-SPVE--DVWRQFDAVYKAGLAKAVGVSNWNNDQISRALA 165
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 662 HPYLNQKRLKEFCXARGVXITAYSPLGSPDR 754
H Y Q +FC + +T+Y+ LGSP R
Sbjct: 179 HLYFPQHDHVDFCKKHNISVTSYATLGSPGR 209
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 140 bits (340), Expect = 1e-33
Identities = 70/173 (40%), Positives = 103/173 (59%)
Frame = +3
Query: 96 MAPKIPVVTFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGE 275
M+ K+P+ T +NG +P GLGTW+ E +++A+ GYRHID A +Y NE ++G+
Sbjct: 1 MSSKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGD 60
Query: 276 AITSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYK 455
A+ EG++ RED+FIT+K + PD+V AL+ +L L + Y+DLYL H P + K
Sbjct: 61 ALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTK 120
Query: 456 EDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKV 614
+DGS SDV D W+ E + GL K+IGVSNFN Q+ ++
Sbjct: 121 DDGSF----------RSDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQIVRI 163
Score = 36.7 bits (81), Expect = 0.023
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 662 HPYLNQKRLKEFCXARGVXITAYSPLGSPDR 754
H YL QK +E C + ITAY+ LGSP R
Sbjct: 179 HLYLPQKAHRELCKKHNILITAYATLGSPGR 209
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 105 bits (251), Expect = 6e-23
Identities = 56/164 (34%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Frame = +3
Query: 129 NGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVV 308
NG+ IP LGT+++K ++ AV +A+ +GYR D A Y NEK++G A+ + + +
Sbjct: 6 NGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNI 65
Query: 309 TREDLFITSKL--WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTD 482
ED+++TSK+ +++ + +L+R + E+L+ L+ +YLDL L+H+P+ P D
Sbjct: 66 CSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPR---------PLD 116
Query: 483 QSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKV 614
+ + + DTW A+E L EG ++SIGVSN+ +E++
Sbjct: 117 TEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEEM 160
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 662 HPYLNQKRLKEFCXARGVXITAYSPLG 742
HP+ +K L+ +C + A+SPLG
Sbjct: 176 HPHFQRKVLRAYCNKNEILFQAFSPLG 202
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 103 bits (246), Expect = 2e-22
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Frame = +3
Query: 141 IPVFGLGTWKSKPGEVTQAVKDA-IDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 317
+P+ G+GTW+ + E+ + V DA GYR ID A VY NE ++G + + + RE
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 318 DLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 497
D++ITSKL + R +++E+L NL V+YLDL LIHWP GS ++
Sbjct: 71 DIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWP------GSSLKSENPANK 124
Query: 498 QFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKV 614
+ V++W M ++ EG ++S+GVSNF LE++
Sbjct: 125 KLR----VESWNVMCEMMAEGKLRSVGVSNFEICHLEEL 159
Score = 31.9 bits (69), Expect = 0.66
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 662 HPYLNQKRLKEFCXARGVXITAYSPLGSP 748
HP+ +Q L ++C + AYS LGSP
Sbjct: 175 HPHFHQDDLVKYCNENNIHFQAYSSLGSP 203
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 96.3 bits (229), Expect = 3e-20
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Frame = +3
Query: 117 VTFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 296
+ N G P+ GLGT+K +V + A+ GYR D A VY NEKE+G+A+ +
Sbjct: 3 IKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLP 62
Query: 297 EGVVTREDLFITSKLW-NTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLF 473
+ + RED+FIT+K+ NT V+ + E+L L Y+D+YLIH+P+++ + G
Sbjct: 63 KHNLKREDIFITTKMHPNTVEN---VKKLVDESLSLLKTSYIDMYLIHYPKSF-DYGDQD 118
Query: 474 PTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKV 614
P +++ +I TW + G ++S+GVS+F + LE++
Sbjct: 119 PMNKTLRIA--------TWNDLWECKNAGKIRSVGVSSFEIRHLEEL 157
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 662 HPYLNQKRLKEFCXARGVXITAYSPL 739
HP+ ++ LK +C + G+ A+S L
Sbjct: 174 HPHFTREELKNYCKSEGIFFQAFSSL 199
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 96.3 bits (229), Expect = 3e-20
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Frame = +3
Query: 126 NNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 305
N+G IP G GT+K V A+ A+ GYR D A Y NEKE+GEA+ + +
Sbjct: 16 NSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHG 75
Query: 306 VTREDLFITSKLW-NTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTD 482
++R D+F+TSK + + + + RG ++E+L +L Y+D+YL+H+P+ D D
Sbjct: 76 LSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKPNDSD-----ND 130
Query: 483 QSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKV 614
++ + Y + +E G V+SIGVSN+ LE++
Sbjct: 131 DVNNAEYRKIAY----EVLEEAKAAGKVRSIGVSNYEIVHLEEL 170
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 83.0 bits (196), Expect = 3e-16
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Frame = +3
Query: 108 IPVVTFNNGETIPVFGLGTWKSKPGEVTQAVKDAID-IGYRHIDCAYVYGNEKEVGEAIT 284
IP +N +P+ GLGT S G AV +I GYR ID A YG EK++G A+
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAV- 59
Query: 285 SKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDG 464
K V RE++F+++KLW D V A Q + + L YLD+Y+IH PQ D
Sbjct: 60 ---KNCSVPREEMFLSTKLWPV-DCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQL--PDW 113
Query: 465 SLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLEKV 614
+ + K TW+ ME L ++ V+SIGVSN++ + L+++
Sbjct: 114 IVNQKETKEK----------TWRQMELLYEDEHVRSIGVSNYSIEDLDEL 153
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 662 HPYLNQKRLKEFCXARGVXITAYSPL 739
HP+ +Q LK +C G+ Y PL
Sbjct: 169 HPWFHQADLKNYCDELGILTMGYCPL 194
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 81.0 bits (191), Expect = 1e-15
Identities = 42/85 (49%), Positives = 53/85 (62%)
Frame = +3
Query: 117 VTFNNGETIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 296
+T +N ++P GLGTW+S +V AVK A+ GY ID A Y NE+ +G AI I
Sbjct: 48 LTLSNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIA 107
Query: 297 EGVVTREDLFITSKLWNTFHRPDLV 371
EGVV REDLFIT+K+ N F LV
Sbjct: 108 EGVVKREDLFITTKVPNLFSSLRLV 132
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 72.1 bits (169), Expect = 5e-13
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Frame = +3
Query: 123 FNNGETIPVFGLGTWKSKPGE-VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKE 299
F++G +P GLG + + + + +++ A+ GYR D A +Y NE +G ++ + +
Sbjct: 14 FSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQ 73
Query: 300 GVVTREDLFITSKLWN-TFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 476
+TRED+FIT+K+ + + L +L L Y+DL LIH+P+ ++ G+
Sbjct: 74 FGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRD-RDTGN--- 129
Query: 477 TDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNF 590
D +I S V W+ +E + G V+SIGVSN+
Sbjct: 130 -DDDYEINKSRRKIV--WQTLEKAKESGRVRSIGVSNY 164
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 650 RWKCHPYLNQKRLKEFCXARGVXITAYSPL 739
+++ PYL + LK+FC + + +YS L
Sbjct: 184 QYEYQPYLTRPTLKKFCDLNNIVVQSYSSL 213
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/88 (37%), Positives = 53/88 (60%)
Frame = +3
Query: 342 WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYV 521
W P + GAL+++L L+++Y+DLYL H P A+ + D S KI+ S V+
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSD-------DMSQKIE-SSVE-- 102
Query: 522 DTWKAMEPLVKEGLVKSIGVSNFNSKQL 605
D W+ + + K GL K++GVSN+N+ Q+
Sbjct: 103 DIWRQFDAVYKAGLAKAVGVSNWNNDQI 130
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.16
Identities = 30/119 (25%), Positives = 49/119 (41%)
Frame = +1
Query: 442 PRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRRLLQ 621
P PT K S P+N S ++ + TP + + + K V + + S T S + L
Sbjct: 302 PTPTTKKTQSVTPSNSTPSPAKPA---TPTKTPTPTKKPVENNETLSQVKTVS---KALS 355
Query: 622 HATVKPVVNQVEMSSLPQPETPQGVL*XSRREXHSVLSPRLAGQXLGXAPTXPSSMEXP 798
H+ P N E S+ P P+ P + + SP+ + L P+ P+ P
Sbjct: 356 HSPKSPKKNSQEKSAPPSPKLPPKTTAPTPTKDGGNHSPKTTNKALEPPPS-PNRTHSP 413
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 427 T*YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASE---SPTSTR 597
T + G RP + S+ + +V+ R S TW+ R SRS R R+ E S S +
Sbjct: 42 TDFVGKRPKKHHRHKSKKSKKVR---RRSKTWSSSRSRSRSRSRSRGRSQERRRSRKSRK 98
Query: 598 SSWRRLLQHATVKPVVNQVEMSSLPQPE 681
S R L+H K + + + P+ E
Sbjct: 99 SRSRSRLKHREEK--IEKKNLEKAPKNE 124
>AC006730-11|ABO16462.1| 327|Caenorhabditis elegans Hypothetical
protein Y27F2A.11 protein.
Length = 327
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = -3
Query: 332 SYEQIFPRYDSFLNFAGYSFS----DFLLVSVNIGTVDVSVANVNGILDCLRHLAWLRLP 165
+Y + P + S NF+ Y FS F++ ++ G++ V ++ +L+ +R L+ LRL
Sbjct: 185 TYPDLLPEFKSLPNFSIYDFSVHFKIFIIYAITGGSIGFIVFSL-VLLNIIRMLSQLRLK 243
Query: 164 RS*SKY 147
S S Y
Sbjct: 244 ISKSNY 249
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 475 RPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTST 594
RP + +S SR+ TP R W+R+ R S+A S T T
Sbjct: 358 RPVRRSRSRSRSR---TPNRNWTRARSRTRSQAKSSSTLT 394
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 377 CPAGDPGQSERSVLGSVPDTLAPGLQGRR 463
CPAG+PG E GS + PGL+GRR
Sbjct: 150 CPAGEPG--EPGPRGSPGNNGLPGLKGRR 176
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 442 PRPTRKTALSSRPTNQVKSSSRTSITWTPG 531
P TRK S P+ ++S SR S T TPG
Sbjct: 475 PPVTRKVRKSMMPSESIRSVSRNSSTSTPG 504
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 459 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVS 584
DGS PTD SG + D + + T PL K+GL S S
Sbjct: 5915 DGSPLPTDDSGAVIGPDGEVIPTDSNGIPLNKDGLPLSTDAS 5956
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 459 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVS 584
DGS PTD SG + D + + T PL K+GL S S
Sbjct: 5960 DGSPLPTDDSGAVIGPDGEVIPTDSNGIPLNKDGLPLSTDAS 6001
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 459 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVS 584
DGS PTD SG + D + + T PL K+GL S S
Sbjct: 5960 DGSPLPTDDSGAVIGPDGEVIPTDSNGIPLNKDGLPLSTDAS 6001
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 444 GASVSGTDPSTERSDCPGSPAGHRAPSP 361
GAS G+ P+ E++ P PA PSP
Sbjct: 169 GASSGGSAPAAEKAPEPAKPAASSQPSP 196
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 386 GDPGQSERSVLGSVPDTLAPGLQGR 460
G PGQ +S+ G V APGLQG+
Sbjct: 1261 GMPGQPGQSIAGPVGPPGAPGLQGK 1285
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 386 GDPGQSERSVLGSVPDTLAPGLQGR 460
G PGQ +S+ G V APGLQG+
Sbjct: 1260 GMPGQPGQSIAGPVGPPGAPGLQGK 1284
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 386 GDPGQSERSVLGSVPDTLAPGLQGR 460
G PGQ +S+ G V APGLQG+
Sbjct: 1260 GMPGQPGQSIAGPVGPPGAPGLQGK 1284
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 386 GDPGQSERSVLGSVPDTLAPGLQGR 460
G PGQ +S+ G V APGLQG+
Sbjct: 1261 GMPGQPGQSIAGPVGPPGAPGLQGK 1285
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 386 GDPGQSERSVLGSVPDTLAPGLQGR 460
G PGQ +S+ G V APGLQG+
Sbjct: 1297 GMPGQPGQSIAGPVGPPGAPGLQGK 1321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,787,701
Number of Sequences: 27780
Number of extensions: 414514
Number of successful extensions: 2043
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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