Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_M01
(968 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.035
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.11
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.14
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.43
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 4.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 4.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.035
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXP 800
P P P P+P P PPPPPP P P P P
Sbjct: 748 PIPVPPPAPIMGGP----PPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.5 bits (73), Expect = 0.046
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 681 PXPXPXPSP-XXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPP 803
P P P P P P PPPPPP + P P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.080
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 738 PPPPPXXXLLXXPXPXPXSXPPXXPXITPP 827
PPPPP ++ P P P PP P + P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGP 761
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXIT 821
P P P P P P PPPPPP + P P PP P ++
Sbjct: 744 PAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPP---PPPPPAVS 786
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 687 PXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXITPP 827
P P P+ P P PPP + P P P PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP---PPGVAGAGPP 776
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXITPP 827
P P P +P P PP P P + P P P P PP
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXIT 821
P P P +P P PP PPP P P P + P P T
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPS---TAPPVPTPSAGLPPVPVPT 1233
Score = 30.7 bits (66), Expect = 0.32
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +3
Query: 687 PXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPP-XXPXITPP 827
P P PS P PP P + P P P PP P + P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Score = 29.1 bits (62), Expect = 0.98
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 8/57 (14%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPP-------PPPPXXXLLXXPXPXPXSXPP-XXPXITPP 827
P P P +P P PP PP P + P P P PP P + P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXITPPS 830
P P P P PP P P L P P + P P PS
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +3
Query: 693 PXPSPXXXXPHXXTPP--PPPPXXXLLXXPXPXPXSXPP-XXPXITPP 827
P P P P P PP P + P P P PP P + P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 7/51 (13%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPP-------PPPPXXXLLXXPXPXPXSXPPXXP 812
P P P +P P PP PP P + P P P S P P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXITPPSXXXQTS 848
P P P +P P PP P P P P + P + PS S
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNAS 1264
Score = 27.1 bits (57), Expect = 4.0
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 9/57 (15%)
Frame = +3
Query: 687 PXPXPS---PXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPP------XXPXITPPS 830
P P PS P P PP P P + P P P PP P + PPS
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGV--PPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Frame = +3
Query: 687 PXPXPS---PXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXITPP 827
P P PS P P PP PPP P P P P PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAP-PVPKPSVGVPPVPPPSTAPP 1218
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPP 803
P P P P PP P P + P P P + PP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGV--PPVPPPSTAPP 1218
Score = 25.8 bits (54), Expect = 9.2
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +3
Query: 720 PHXXTPPPPPPXXXLLXXPXPXPXSXPP-XXPXITPP 827
P + PP P P P P + PP P TPP
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPP 1051
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.98
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +3
Query: 699 PSPXXXXPHXXTPPPPP--PXXXLLXXPXPXPXSXPPXXPXITPPS 830
P+P P P PP P P P S PP P PPS
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPS 434
Score = 27.9 bits (59), Expect(2) = 0.14
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 735 PPPPPPXXXLLXXPXPXP---XSXPPXXPXITPPSXXXQ 842
PPPPPP P P S PP P + PS Q
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ 375
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 720 PHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXITPPS 830
P + PP PP P P P P I PPS
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPS 260
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 693 PXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXITP 824
P P TPP P P P P S PP P P
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 22.6 bits (46), Expect(2) = 0.14
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +3
Query: 681 PXPXPXPSPXXXXPHXXTPPPPPP 752
P P S + PPPPPP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPP 316
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.43
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 687 PXPXPSPXXXXPHXXTPPPPPP 752
P P P P P PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 678 NPXPXPXPSPXXXXPHXXTPPPPP 749
NP P P P P P PPPPP
Sbjct: 8 NPPPPP-PPPGFEPPSQPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +3
Query: 732 TPPPPP----PXXXLLXXPXPXPXSXPPXXPXITPPS 830
TPPPPP P P P + PP P + PS
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/50 (28%), Positives = 17/50 (34%)
Frame = +3
Query: 678 NPXPXPXPSPXXXXPHXXTPPPPPPXXXLLXXPXPXPXSXPPXXPXITPP 827
+P P P P + P PPP + P P P P PP
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPP-PPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +3
Query: 687 PXPXPSPXXXXPHXXTPPPP--PPXXXLLXXPXPXPXSXPPXXP 812
P P P P P PP P PP P P P S P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAP----PPPLPASSAPSVP 1744
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/46 (30%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +3
Query: 693 PXPSPXXXXPHXXTPPPPPPXXXLLXXPXP-XPXSXPPXXPXITPP 827
P PS P PP P P P + PP P + PP
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 4.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 732 TPPPPPP 752
TPPPPPP
Sbjct: 906 TPPPPPP 912
Score = 21.8 bits (44), Expect(2) = 4.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 735 PPPPPPXXXLL 767
PPPPPP L+
Sbjct: 945 PPPPPPPPPLV 955
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,983,946
Number of Sequences: 5004
Number of extensions: 29847
Number of successful extensions: 177
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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