Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_L12
         (943 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340...    30   3.1  
01_01_0570 - 4231100-4232560                                           28   9.4  

>03_06_0399 -
           33632811-33633107,33633236-33633385,33633705-33634029,
           33635315-33635982,33636967-33637212,33637405-33637545,
           33637807-33637856,33637943-33638060,33638304-33638910,
           33639339-33639463,33639813-33639869,33639952-33640023,
           33640100-33640232,33640305-33640428,33640522-33640576,
           33640672-33641322
          Length = 1272

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +1

Query: 727 LGASPPVXXPXXLQXTCAPSXLRXSVXPFXXAPPVPFPXRCXS-XXPXLGXFPXPPXSPX 903
           L ASP    P  L+     S +  +  P   +PP P P          L  FP PP +P 
Sbjct: 14  LPASPVASPPRRLKRLKKSSQIATAAHPVVGSPPPPSPPPPPPLDEETLAQFPSPPTNPS 73

Query: 904 EGP 912
             P
Sbjct: 74  PPP 76


>01_01_0570 - 4231100-4232560
          Length = 486

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/58 (29%), Positives = 20/58 (34%)
 Frame = -3

Query: 911 GPSXGLXGGXGXXPRXGXXDXHRXGKGTGGAXXKGXTLXRRXEGAQVXCKXXGSXTGG 738
           G   G+ GG G     G     R G G GG    G  +  R  G     +  G   GG
Sbjct: 419 GGGLGVGGGGGAGGGIGASRGARGGSGAGGGAGMGGGVGARAGGGGEHKRGGGKHHGG 476


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,171,894
Number of Sequences: 37544
Number of extensions: 172020
Number of successful extensions: 466
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)