Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_L12
         (943 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015621-1|AAH15621.1|  245|Homo sapiens C14orf32 protein protein.     35   0.49 
AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens ...    31   6.1  

>BC015621-1|AAH15621.1|  245|Homo sapiens C14orf32 protein protein.
          Length = 245

 Score = 34.7 bits (76), Expect = 0.49
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = +1

Query: 712 PLXXPLGASPPVXXPXXLQXTCAPSXLRXSVXPFXX--APPVPFPXRCXSXXPXLGXFPX 885
           P   P G  PP   P  +    AP+ +  SV P      PP PFP    S  P  G +P 
Sbjct: 46  PSSVPSGL-PPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPA 104

Query: 886 PPXSPXEGP 912
           P   P  GP
Sbjct: 105 PTV-PGPGP 112


>AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22184 fis, clone HRC00983. ).
          Length = 616

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 21/67 (31%), Positives = 24/67 (35%)
 Frame = +1

Query: 712 PLXXPLGASPPVXXPXXLQXTCAPSXLRXSVXPFXXAPPVPFPXRCXSXXPXLGXFPXPP 891
           PL  P   +PP   P  LQ   +P        P   A P P      +  P  G  P PP
Sbjct: 44  PLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQG-LPSPP 102

Query: 892 XSPXEGP 912
            SP   P
Sbjct: 103 LSPLATP 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,428,805
Number of Sequences: 237096
Number of extensions: 913477
Number of successful extensions: 1889
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12381054106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)