Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_L08
(988 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0059 - 394001-394708 34 0.15
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.5
11_01_0066 - 536281-537196,537397-537452 30 3.3
11_06_0610 - 25449085-25453284 29 4.3
07_03_0558 + 19461369-19462448 29 4.3
07_03_0177 - 14770777-14772045 29 4.3
01_01_0570 - 4231100-4232560 29 4.3
08_02_1084 - 24232968-24234779 29 7.5
07_03_1751 - 29215074-29216270 29 7.5
07_03_0559 + 19475893-19476783 29 7.5
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904... 28 10.0
>08_01_0059 - 394001-394708
Length = 235
Score = 34.3 bits (75), Expect = 0.15
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -2
Query: 579 PPPPGXSPPXXXXRXAXXLXXXTXXXXPXPXXXXHXPXPXXXQLPXXPSHESXAXPLXLP 400
PPPP PP R A P P + P P L P H S P+ P
Sbjct: 11 PPPPATPPPPP--RRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPP 68
Query: 399 PXXP 388
P P
Sbjct: 69 PSPP 72
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -3
Query: 128 PXNPXXSLTP-PYSXPPATXXXLPXPPXXGXXSAHPXXXXXPP 3
P P TP PY+ PP + P PP + P PP
Sbjct: 31 PIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPPSPPP 73
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/87 (26%), Positives = 27/87 (31%)
Frame = -3
Query: 971 GRSLXLAPEPXTXFPXXXTPTLRXXXLPXGGRXRPPRXXAPXPPQXXXXSLFHAXPPAPX 792
G + AP P P P L G PP P PP + A PP P
Sbjct: 269 GGQVPAAPPPPAGPPPPAPPPLPPSHHHHHGHHPPPPH--PLPPGAGAGAGTGAPPPPPA 326
Query: 791 NPXEPXXFXXXXDXTXXXXPXGXPPXP 711
+P P + G PP P
Sbjct: 327 HPAAPAPPPPAPSPSAAGAGSGPPPPP 353
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = -1
Query: 487 SXPPXXXTXPXXTPXTAXPREFXXXPPPSPXXTXXKGFSVSXXXTTNTKKLXAPPXXXRX 308
S PP P +P + P PPPSP T + T T + PP R
Sbjct: 214 SPPPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASPTPPPIPTAT--VRPPPPLPRA 271
Query: 307 XXXXXP-XPXKTPXXXP 260
P P T P
Sbjct: 272 TVTPTPTTPPSTATTTP 288
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 499 PXXXSXPPXXXTXPXXTPXTAXPREFXXXPPPSP 398
P + PP + P TP ++ P PPPSP
Sbjct: 936 PAKSTPPPEEKSPPSHTPESSSPPSEESEPPPSP 969
Score = 29.1 bits (62), Expect = 5.7
Identities = 32/141 (22%), Positives = 41/141 (29%), Gaps = 3/141 (2%)
Frame = -2
Query: 579 PPPPGXSPPXXXXRXAXXLXXXTXXXXPXPXXXXHXPXPXXXQLPXXPSHESXAXPLXLP 400
PPPP SPP + L T P P P + PS ES P P
Sbjct: 867 PPPPEKSPPPPETKSPPTL---TPEISPPP--EGKSPPSHTPESSSPPSKESEPPPTPTP 921
Query: 399 -PXXPXXKDFXFPXXXQQT--QKN*XXPXHXXGXSXXXXPXLXKPLXXSPXXXXPGXXXI 229
P +++ P + T + P H S P +P P
Sbjct: 922 KSSPPSHEEYVPPSPAKSTPPPEEKSPPSHTPESSSPPSEESEPPPSPTPKSSPPSHEEY 981
Query: 228 LXPXXXXXXXXPXXXXSPPTP 166
+ P P P TP
Sbjct: 982 VPPSPAKSTPPPEKPLPPHTP 1002
>07_03_0558 + 19461369-19462448
Length = 359
Score = 29.5 bits (63), Expect = 4.3
Identities = 39/159 (24%), Positives = 43/159 (27%)
Frame = +3
Query: 117 GIGGVVGXXXGXGGGWGV*GGXXXXXXXXVXXXXXXXGXXXXXGXLXWGXX*GVXXGWGX 296
G GG G G GGG G GG + G G + G GV G G
Sbjct: 116 GFGGGAGAGGGAGGGLGGGGGFGGGGGGGLGGGGGHGGGFGAGGGVGGGAGGGVGGGGGF 175
Query: 297 XXXXXRXXXGGAXNXXXXXXXXXETENPXXXVXXGEGGGXXXNSRGXAVXGVXXGXVXXX 476
GG G GGG G + G G
Sbjct: 176 GGGGGGGLGGGHGGGFGGGAGVGGGAGGGVGGGGGFGGGG-----GSGLGGGQGGGFGAG 230
Query: 477 GGXEXXLGXRXRXXAXGXLXL*XXXXGGTXPEGGGXXVG 593
GG +G G L GG GGG VG
Sbjct: 231 GGAGGGIGGGGGFGGGGGGGLGGGHGGGF---GGGAGVG 266
Score = 28.3 bits (60), Expect = 10.0
Identities = 32/125 (25%), Positives = 34/125 (27%)
Frame = +3
Query: 108 GXXGIGGVVGXXXGXGGGWGV*GGXXXXXXXXVXXXXXXXGXXXXXGXLXWGXX*GVXXG 287
G G GG G G GGG G+ GG G G G G+ G
Sbjct: 54 GGGGFGGGGGGGLGGGGG-GLGGGHGGGFGGGGGLGGGASGGVGGGGGFGGGGGGGLGGG 112
Query: 288 WGXXXXXXRXXXGGAXNXXXXXXXXXETENPXXXVXXGEGGGXXXNSRGXAVXGVXXGXV 467
G GGA G GGG G V G G V
Sbjct: 113 QGGGFGGGAGAGGGAGGGLGGGGGFGGGGGGGLGGGGGHGGGF---GAGGGVGGGAGGGV 169
Query: 468 XXXGG 482
GG
Sbjct: 170 GGGGG 174
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 108 GXXGIGGVVGXXXGXGGGWGV*GG 179
G G+GG G G GGG+G GG
Sbjct: 193 GGAGVGGGAGGGVGGGGGFGGGGG 216
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 108 GXXGIGGVVGXXXGXGGGWGV*GG 179
G G+GG G G GGG+G GG
Sbjct: 297 GGAGVGGGAGGGVGGGGGFGGGGG 320
>07_03_0177 - 14770777-14772045
Length = 422
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 108 GXXGIGGVVGXXXGXGGGWGV*GG 179
G G+GG +G G GGG+G GG
Sbjct: 203 GGGGLGGGIGKGGGLGGGFGKGGG 226
Score = 28.7 bits (61), Expect = 7.5
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +3
Query: 117 GIGGVVGXXXGXGGGWGV*GGXXXXXXXXVXXXXXXXGXXXXXGXLXWGXX*GVXXGWG 293
G+GG G G GGG G+ GG + G G L G G G G
Sbjct: 258 GLGGGFGKGGGLGGGGGLGGGEDGGLGGGIGKGGGIGGGFGKGGGLGGGGGLGGGGGLG 316
>01_01_0570 - 4231100-4232560
Length = 486
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 108 GXXGIGGVVGXXXGXGGGWGV*GG 179
G G+GG VG G GGG G GG
Sbjct: 118 GGGGVGGGVGAGFGSGGGVGAGGG 141
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 108 GXXGIGGVVGXXXGXGGGWGV*GG 179
G G GG +G G GGG GV GG
Sbjct: 372 GGSGFGGGLGGGGGIGGGLGVGGG 395
>08_02_1084 - 24232968-24234779
Length = 603
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 872 RPPRXXAPXPPQXXXXSLFHAXPPAPXNPXEP 777
+PP P PPQ H+ PP P P P
Sbjct: 72 QPPSQQLPPPPQQQQPPPQHSLPPPPPLPQAP 103
>07_03_1751 - 29215074-29216270
Length = 398
Score = 28.7 bits (61), Expect = 7.5
Identities = 30/127 (23%), Positives = 32/127 (25%), Gaps = 2/127 (1%)
Frame = +3
Query: 108 GXXGIGGVVGXXXGXGG--GWGV*GGXXXXXXXXVXXXXXXXGXXXXXGXLXWGXX*GVX 281
G G+GG G G GG G G GG G G G G
Sbjct: 197 GGAGVGGGAGGGAGGGGGLGGGAGGGAGGGGGLGGGAGGGHGGGGGLGGGAGGGAGVGGG 256
Query: 282 XGWGXXXXXXRXXXGGAXNXXXXXXXXXETENPXXXVXXGEGGGXXXNSRGXAVXGVXXG 461
G G GGA G+GGG G G G
Sbjct: 257 AGGGAGAGGGLGAGGGAGGGGGIGGGAGGGAGAGGGFGGGKGGGFGGGGGGGGGAGAGGG 316
Query: 462 XVXXXGG 482
GG
Sbjct: 317 FGGGKGG 323
Score = 28.3 bits (60), Expect = 10.0
Identities = 29/122 (23%), Positives = 33/122 (27%)
Frame = +3
Query: 117 GIGGVVGXXXGXGGGWGV*GGXXXXXXXXVXXXXXXXGXXXXXGXLXWGXX*GVXXGWGX 296
G+GG G G GGG G+ GG + G G G G G
Sbjct: 152 GVGGGAGAGGGAGGGGGLGGGAGGGAGGGLGGGSGGGGGLGGGAGGGAGVGGGAGGGAGG 211
Query: 297 XXXXXRXXXGGAXNXXXXXXXXXETENPXXXVXXGEGGGXXXNSRGXAVXGVXXGXVXXX 476
GGA + G GGG G A G G
Sbjct: 212 GGGLGGGAGGGAGGGGGLGGGAGGGHGGGGGLGGGAGGGAGVG--GGAGGGAGAGGGLGA 269
Query: 477 GG 482
GG
Sbjct: 270 GG 271
>07_03_0559 + 19475893-19476783
Length = 296
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 108 GXXGIGGVVGXXXGXGGGWGV*GG 179
G G GGV+G G GGG G GG
Sbjct: 219 GGFGAGGVMGGGAGGGGGLGGGGG 242
>03_02_0514 +
9038606-9039790,9040211-9040432,9040548-9040655,
9041608-9041802,9041905-9042153,9042525-9042672,
9042673-9042779,9043311-9043475,9044506-9045948
Length = 1273
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 123 GGVVGXXXGXGGGWGV*GG 179
GG G G GGGWG GG
Sbjct: 93 GGAGGPLGGGGGGWGAGGG 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,522,530
Number of Sequences: 37544
Number of extensions: 290030
Number of successful extensions: 1890
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1742
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2881826040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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