Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_L08
         (988 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.0  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.6  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 24/97 (24%), Positives = 29/97 (29%)
 Frame = -3

Query: 986 PRHXPGRSLXLAPEPXTXFPXXXTPTLRXXXLPXGGRXRPPRXXAPXPPQXXXXSLFHAX 807
           P   PG  + + P      P   TPT      P G   +PP    P  PQ    ++    
Sbjct: 183 PGMPPGPQM-MRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQ 241

Query: 806 PPAPXNPXEPXXFXXXXDXTXXXXPXGXPPXPXXXPR 696
           P     P  P              P   PP P   PR
Sbjct: 242 P--GMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPR 276


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +3

Query: 108 GXXGIGGVVGXXXGXGGGWG 167
           G   IGG VG   G GGG G
Sbjct: 726 GCGSIGGEVGSVGGGGGGGG 745


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 797 GREGXHGIKXXXXPVGXXGR 856
           G EG HG+K    P G  GR
Sbjct: 368 GSEGLHGLKGQSGPKGEPGR 387


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 123 GGVVGXXXGXGGGWGV*GG 179
           GG VG   G GGG G  GG
Sbjct: 673 GGAVGGGSGAGGGAGSSGG 691



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 108 GXXGIGGVVGXXXGXGGGWGV*GG 179
           G  G+G  +G   G GGG    GG
Sbjct: 551 GRGGVGSGIGGGGGGGGGGRAGGG 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,152
Number of Sequences: 2352
Number of extensions: 5185
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108119037
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)