Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_L08
         (988 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.        33   1.2  
L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1...    33   1.2  
BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger ...    33   1.2  
BC065551-1|AAH65551.1|  440|Homo sapiens WAS/WASL interacting pr...    31   4.9  
AJ431177-1|CAD24007.1|  440|Homo sapiens WIRE protein protein.         31   4.9  
AB043786-1|BAB85113.1|  440|Homo sapiens WICH protein.                 31   4.9  

>Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.
          Length = 639

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
 Frame = -3

Query: 869 PPRXXAPXPPQXXXXSLFHAXPPAPXNPXEPXXFXXXXD-XTXXXXPXGXPPXPXXXP 699
           P     P PP      + +A PP P  P +P  F            P G PP P   P
Sbjct: 579 PGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPP 636


>L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1
           protein.
          Length = 639

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
 Frame = -3

Query: 869 PPRXXAPXPPQXXXXSLFHAXPPAPXNPXEPXXFXXXXD-XTXXXXPXGXPPXPXXXP 699
           P     P PP      + +A PP P  P +P  F            P G PP P   P
Sbjct: 579 PGAPPPPPPPPPVSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGIPPFGMPPAPPPPP 636


>BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger
           protein 162 protein.
          Length = 265

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
 Frame = -3

Query: 869 PPRXXAPXPPQXXXXSLFHAXPPAPXNPXEPXXFXXXXD-XTXXXXPXGXPPXPXXXP 699
           P     P PP      + +A PP P  P +P  F            P G PP P   P
Sbjct: 205 PGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPP 262


>BC065551-1|AAH65551.1|  440|Homo sapiens WAS/WASL interacting
           protein family, member 2 protein.
          Length = 440

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 21/63 (33%), Positives = 24/63 (38%)
 Frame = -3

Query: 983 RHXPGRSLXLAPEPXTXFPXXXTPTLRXXXLPXGGRXRPPRXXAPXPPQXXXXSLFHAXP 804
           R  PG    LAP P    P   +P+L     P   R  P R  AP PP     +     P
Sbjct: 285 RKTPGPVRGLAPPP----PTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAP 340

Query: 803 PAP 795
           P P
Sbjct: 341 PPP 343


>AJ431177-1|CAD24007.1|  440|Homo sapiens WIRE protein protein.
          Length = 440

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 21/63 (33%), Positives = 24/63 (38%)
 Frame = -3

Query: 983 RHXPGRSLXLAPEPXTXFPXXXTPTLRXXXLPXGGRXRPPRXXAPXPPQXXXXSLFHAXP 804
           R  PG    LAP P    P   +P+L     P   R  P R  AP PP     +     P
Sbjct: 285 RKTPGPVRGLAPPP----PTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAP 340

Query: 803 PAP 795
           P P
Sbjct: 341 PPP 343


>AB043786-1|BAB85113.1|  440|Homo sapiens WICH protein.
          Length = 440

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 21/63 (33%), Positives = 24/63 (38%)
 Frame = -3

Query: 983 RHXPGRSLXLAPEPXTXFPXXXTPTLRXXXLPXGGRXRPPRXXAPXPPQXXXXSLFHAXP 804
           R  PG    LAP P    P   +P+L     P   R  P R  AP PP     +     P
Sbjct: 285 RKTPGPVRGLAPPP----PTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAP 340

Query: 803 PAP 795
           P P
Sbjct: 341 PPP 343


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,755,432
Number of Sequences: 237096
Number of extensions: 1343231
Number of successful extensions: 4999
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4832
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13213860436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)