Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_L07
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650...    32   0.65 
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52...    31   1.1  
04_01_0180 + 2034021-2034023,2034741-2035088                           30   2.0  
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665     29   3.5  
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401     28   8.0  
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902...    28   8.0  

>05_03_0415 -
           13661745-13664240,13664376-13664401,13665018-13665035,
           13665914-13666181,13666531-13666598,13667102-13667243
          Length = 1005

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = -2

Query: 426 PCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 268
           P  R SA T+    WP    L A+ +R L  AL+CC + S PS    L++C S
Sbjct: 99  PGLRASAPTLR---WPFPRLLDAIAFRPLPCALACCGS-SAPSVVRHLRACGS 147


>02_01_0075 -
           522554-522616,522742-522748,523033-523136,523237-523368,
           525209-525401,525978-526330,526693-526791,526864-526935,
           527062-527213,527338-527386,527755-527885,528067-528307,
           528392-528565,528656-528797,529236-529282,529370-529450,
           530170-530271,530345-530440,531437-531444,531575-531616,
           531830-531894,534761-534853,534888-534959,535303-535509,
           536318-537226,537503-538158
          Length = 1429

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +3

Query: 357 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 500
           A+ DA G+ ++A+E     ++   E+L  A+PDVE     L E L+ A
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEA 562


>04_01_0180 + 2034021-2034023,2034741-2035088
          Length = 116

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 387 EALEQSRQNIERTAEELRKAHPDVEKNATALREK 488
           EALE+  QN+ R  EE +K H +++K    L  K
Sbjct: 52  EALERQVQNLTRYKEEKQKQHANLQKEFAELERK 85


>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
          Length = 727

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +3

Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXXLAXKV 545
           DA G+  EA+E     +    E+L  A+PDV+     L E L+ A     +++  L   +
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSLENLL 696

Query: 546 SSN 554
            +N
Sbjct: 697 ETN 699


>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
          Length = 500

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 363 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 494
           GD  G+ + A+  +R   E  A  LR+A    ++ A ALR +++
Sbjct: 47  GDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90


>02_02_0331 +
           9017291-9019084,9019205-9019402,9020014-9020184,
           9020292-9020435,9020552-9020764,9020859-9021929,
           9022365-9022391
          Length = 1205

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 384 KEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVXNTVQE 521
           K+  +QS    ERT  E + KAH ++ K      E +QAA    +QE
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQE 462


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,642,559
Number of Sequences: 37544
Number of extensions: 261939
Number of successful extensions: 1105
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)