BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_L07
(838 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 5.0
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 24 6.6
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 24 6.6
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 24 6.6
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 24 6.6
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 6.6
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.2 bits (50), Expect = 5.0
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 9 PTTXYREFL-RFDTLLCVCSPGS 74
P T RE + RF LL VC+PGS
Sbjct: 1072 PITPVREGMARFALLLEVCAPGS 1094
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 23.8 bits (49), Expect = 6.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQ 518
+A+ KA EAL+++ + A ++ + REKL T Q
Sbjct: 75 EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQ 125
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 23.8 bits (49), Expect = 6.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQ 518
+A+ KA EAL+++ + A ++ + REKL T Q
Sbjct: 75 EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQ 125
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 23.8 bits (49), Expect = 6.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQ 518
+A+ KA EAL+++ + A ++ + REKL T Q
Sbjct: 75 EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQ 125
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 23.8 bits (49), Expect = 6.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQ 518
+A+ KA EAL+++ + A ++ + REKL T Q
Sbjct: 75 EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQ 125
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.8 bits (49), Expect = 6.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 366 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQ 518
+A+ KA EAL+++ + A ++ + REKL T Q
Sbjct: 1214 EAHKKASEALKKANDAFNQQANITKELDTSISSEIAQAREKLNTVSKLTEQ 1264
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,462
Number of Sequences: 2352
Number of extensions: 7935
Number of successful extensions: 111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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