Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_L03
         (730 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.2  
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186...    29   3.8  
01_03_0005 + 11568545-11569119,11569179-11569191                       29   3.8  
01_01_0082 + 625198-625719                                             29   5.0  
12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,179...    28   6.6  
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440...    28   6.6  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 577 PPPXXKXXKPXFXXXPPPPP 518
           PPP     KP F   PPPPP
Sbjct: 550 PPPPPSGNKPAFSPPPPPPP 569


>11_01_0242 -
           1862106-1862210,1862302-1862320,1863082-1863257,
           1863359-1863405,1864443-1865022
          Length = 308

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
 Frame = +2

Query: 428 PPPPXGGXXXXXX----KKXXXPXKNKNXXPPFXGGGGGXXXKXXFXXFXXGGG 577
           PPPP G           +K     K  +   P+ GGGGG         +  GGG
Sbjct: 23  PPPPYGSSPAPSAPPYGEKPPKEGKTSSSSAPYYGGGGGYGAPPSTQPYGSGGG 76


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/50 (34%), Positives = 17/50 (34%)
 Frame = -3

Query: 575 PPPXXXXKTXFXXXPPPPPXKXGGXXFYFFXGXPXFXXXXXXPPPXGGGG 426
           PPP     T     PPPP    GG       G          PPP  GGG
Sbjct: 56  PPPPPPVVTPTPQCPPPPSYPSGGGG----GGGGGTVMYTSPPPPYSGGG 101


>01_01_0082 + 625198-625719
          Length = 173

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/53 (30%), Positives = 17/53 (32%)
 Frame = -3

Query: 584 FXXPPPXXXXKTXFXXXPPPPPXKXGGXXFYFFXGXPXFXXXXXXPPPXGGGG 426
           +  PPP     T     PPPP               P        PPP GGGG
Sbjct: 50  YASPPPPDVLPTPVYYPPPPPVYYPPPSPPPVAYPPPTTPSTNCPPPPYGGGG 102


>12_01_0239 -
           1793612-1793716,1793808-1793826,1794424-1794599,
           1794701-1794747,1795760-1796291
          Length = 292

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/54 (29%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
 Frame = +2

Query: 428 PPPPXGGXXXXXXK----KXXXPXKNKNXXPPFXGGGGGXXXKXXFXXFXXGGG 577
           PPPP G            K     K  +   P+ GGGGG         +  GGG
Sbjct: 23  PPPPYGSSPAPSAPPYGAKPPKEGKTSSSSAPYYGGGGGYGAPPSTQPYGSGGG 76


>09_04_0684 -
           19442335-19442990,19443774-19443839,19443935-19444032,
           19444787-19445157
          Length = 396

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/53 (28%), Positives = 19/53 (35%)
 Frame = -3

Query: 575 PPPXXXXKTXFXXXPPPPPXKXGGXXFYFFXGXPXFXXXXXXPPPXGGGGXXF 417
           PP        +   PPPPP    G    +  G P +      PPP  GG   +
Sbjct: 309 PPGYQGSNQGYQGPPPPPPSAYQGNNPGYQGGGPGY--QGGNPPPYQGGNPGY 359


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,134,642
Number of Sequences: 37544
Number of extensions: 417079
Number of successful extensions: 1674
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)