Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_K23
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical p...    29   3.3  
AF047657-8|AAK18944.1|  328|Caenorhabditis elegans Hypothetical ...    29   5.8  
Z82088-3|CAF32230.1|  978|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z82088-2|CAB05001.1|  705|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z82088-1|CAB05000.2|  901|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81490-5|CAF32231.1|  978|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81490-4|CAB04016.1|  705|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81490-3|CAB04015.2|  901|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AJ303082-1|CAC19896.1|  901|Caenorhabditis elegans PMR1 protein ...    28   7.7  
AJ303081-1|CAC19895.1|  901|Caenorhabditis elegans PMR1 protein ...    28   7.7  
AC006729-6|AAF60464.1|  282|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical
           protein C36B1.12c protein.
          Length = 662

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 523 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 419
           +RQ      +  + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 523 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 419
           +RQ      +  + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425


>Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical
           protein C36B1.12a protein.
          Length = 652

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 523 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 419
           +RQ      +  + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425


>AF047657-8|AAK18944.1|  328|Caenorhabditis elegans Hypothetical
           protein F37B4.10 protein.
          Length = 328

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 616 VSPLEAPSCALLFRPCRLPDTCPPFSLRESVALS 717
           V  +E P+  +   P RLPD CPP  + E + L+
Sbjct: 129 VREVEVPTVNVAPVPARLPDFCPPARVPEHLQLN 162


>Z82088-3|CAF32230.1|  978|Caenorhabditis elegans Hypothetical
           protein ZK256.1c protein.
          Length = 978

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +3

Query: 558 KIDAQVRGGETRQDYKDTRRFPPGSSLVRSPVPTLPLTGYLSAFLPSGKRGAFS*LTLXV 737
           +ID     GET   +K+TR   P +S   S V  L    ++   + +G+       T   
Sbjct: 243 QIDESSLTGETEPKHKETRSV-PAASATGSDVEHLTCIAFMGTLVCAGRGRGIVISTAAN 301

Query: 738 SQFGVXRSLQAG 773
           SQFG    +  G
Sbjct: 302 SQFGEVVKMMMG 313


>Z82088-2|CAB05001.1|  705|Caenorhabditis elegans Hypothetical
           protein ZK256.1b protein.
          Length = 705

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +3

Query: 558 KIDAQVRGGETRQDYKDTRRFPPGSSLVRSPVPTLPLTGYLSAFLPSGKRGAFS*LTLXV 737
           +ID     GET   +K+TR   P +S   S V  L    ++   + +G+       T   
Sbjct: 166 QIDESSLTGETEPKHKETRSV-PAASATGSDVEHLTCIAFMGTLVCAGRGRGIVISTAAN 224

Query: 738 SQFGVXRSLQAG 773
           SQFG    +  G
Sbjct: 225 SQFGEVVKMMMG 236


>Z82088-1|CAB05000.2|  901|Caenorhabditis elegans Hypothetical
           protein ZK256.1a protein.
          Length = 901

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +3

Query: 558 KIDAQVRGGETRQDYKDTRRFPPGSSLVRSPVPTLPLTGYLSAFLPSGKRGAFS*LTLXV 737
           +ID     GET   +K+TR   P +S   S V  L    ++   + +G+       T   
Sbjct: 166 QIDESSLTGETEPKHKETRSV-PAASATGSDVEHLTCIAFMGTLVCAGRGRGIVISTAAN 224

Query: 738 SQFGVXRSLQAG 773
           SQFG    +  G
Sbjct: 225 SQFGEVVKMMMG 236


>Z81490-5|CAF32231.1|  978|Caenorhabditis elegans Hypothetical
           protein ZK256.1c protein.
          Length = 978

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +3

Query: 558 KIDAQVRGGETRQDYKDTRRFPPGSSLVRSPVPTLPLTGYLSAFLPSGKRGAFS*LTLXV 737
           +ID     GET   +K+TR   P +S   S V  L    ++   + +G+       T   
Sbjct: 243 QIDESSLTGETEPKHKETRSV-PAASATGSDVEHLTCIAFMGTLVCAGRGRGIVISTAAN 301

Query: 738 SQFGVXRSLQAG 773
           SQFG    +  G
Sbjct: 302 SQFGEVVKMMMG 313


>Z81490-4|CAB04016.1|  705|Caenorhabditis elegans Hypothetical
           protein ZK256.1b protein.
          Length = 705

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +3

Query: 558 KIDAQVRGGETRQDYKDTRRFPPGSSLVRSPVPTLPLTGYLSAFLPSGKRGAFS*LTLXV 737
           +ID     GET   +K+TR   P +S   S V  L    ++   + +G+       T   
Sbjct: 166 QIDESSLTGETEPKHKETRSV-PAASATGSDVEHLTCIAFMGTLVCAGRGRGIVISTAAN 224

Query: 738 SQFGVXRSLQAG 773
           SQFG    +  G
Sbjct: 225 SQFGEVVKMMMG 236


>Z81490-3|CAB04015.2|  901|Caenorhabditis elegans Hypothetical
           protein ZK256.1a protein.
          Length = 901

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +3

Query: 558 KIDAQVRGGETRQDYKDTRRFPPGSSLVRSPVPTLPLTGYLSAFLPSGKRGAFS*LTLXV 737
           +ID     GET   +K+TR   P +S   S V  L    ++   + +G+       T   
Sbjct: 166 QIDESSLTGETEPKHKETRSV-PAASATGSDVEHLTCIAFMGTLVCAGRGRGIVISTAAN 224

Query: 738 SQFGVXRSLQAG 773
           SQFG    +  G
Sbjct: 225 SQFGEVVKMMMG 236


>AJ303082-1|CAC19896.1|  901|Caenorhabditis elegans PMR1 protein
           protein.
          Length = 901

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +3

Query: 558 KIDAQVRGGETRQDYKDTRRFPPGSSLVRSPVPTLPLTGYLSAFLPSGKRGAFS*LTLXV 737
           +ID     GET   +K+TR   P +S   S V  L    ++   + +G+       T   
Sbjct: 166 QIDESSLTGETEPKHKETRSV-PAASATGSDVEHLTCIAFMGTLVCAGRGRGIVISTAAN 224

Query: 738 SQFGVXRSLQAG 773
           SQFG    +  G
Sbjct: 225 SQFGEVVKMMMG 236


>AJ303081-1|CAC19895.1|  901|Caenorhabditis elegans PMR1 protein
           protein.
          Length = 901

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +3

Query: 558 KIDAQVRGGETRQDYKDTRRFPPGSSLVRSPVPTLPLTGYLSAFLPSGKRGAFS*LTLXV 737
           +ID     GET   +K+TR   P +S   S V  L    ++   + +G+       T   
Sbjct: 166 QIDESSLTGETEPKHKETRSV-PAASATGSDVEHLTCIAFMGTLVCAGRGRGIVISTAAN 224

Query: 738 SQFGVXRSLQAG 773
           SQFG    +  G
Sbjct: 225 SQFGEVVKMMMG 236


>AC006729-6|AAF60464.1|  282|Caenorhabditis elegans Hypothetical
           protein Y24D9A.5 protein.
          Length = 282

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +3

Query: 414 GGNTVIHRIRGITQERTCEQKASKRPGTVK 503
           GG +V +R   + Q+++   ++SKRPG ++
Sbjct: 167 GGKSVFYRFTNLIQKKSFSVRSSKRPGILQ 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,491,728
Number of Sequences: 27780
Number of extensions: 346524
Number of successful extensions: 860
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)