BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_K22
(965 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0585 + 4332352-4332445,4332552-4332667 80 3e-15
06_03_0967 - 26395537-26396590,26400918-26401111 49 5e-06
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.19
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.45
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 32 0.60
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 32 0.79
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 31 1.0
08_01_0649 + 5607234-5608397,5609358-5609513,5609598-5609796,561... 30 2.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.4
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 2.4
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 30 3.2
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 30 3.2
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 3.2
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 29 4.2
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 4.2
12_02_1174 - 26696869-26698191 29 5.5
06_03_0750 - 24140988-24141037,24141108-24141345,24142158-241422... 29 5.5
04_04_1125 + 31085106-31085714 29 5.5
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 7.3
09_02_0543 + 10427321-10428315,10428440-10429154 28 9.7
06_01_0763 + 5712466-5712721,5714302-5715743 28 9.7
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 28 9.7
>02_01_0585 + 4332352-4332445,4332552-4332667
Length = 69
Score = 79.8 bits (188), Expect = 3e-15
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +2
Query: 155 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 334
MD + V+P ++FAKDS+RLV+RC KPDRKEF K+A TA VKLI IP
Sbjct: 1 MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60
Query: 335 INNIIVGS 358
INNIIVGS
Sbjct: 61 INNIIVGS 68
>06_03_0967 - 26395537-26396590,26400918-26401111
Length = 415
Score = 49.2 bits (112), Expect = 5e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +2
Query: 155 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIA 265
MD I V+P ++FAKDS+RLV+RC KPDRK +++A
Sbjct: 1 MDAIDSVVDPLREFAKDSVRLVKRCHKPDRKGRERLA 37
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.9 bits (74), Expect = 0.19
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 522 PSXQXPPXXXXPXXXXIPXPLXGXXXSPPPXXSPPXXXGXXXSPTPKTXXXXVXRGXPPP 701
P+ PP P P P G PP PP SP P G PPP
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.7 bits (71), Expect = 0.45
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +3
Query: 516 NXPSXQXPPXXXXPXXXXIPXPLXGXXXSPPPXXSPPXXXGXXXSPTPKTXXXXV--XRG 689
N P+ PP P +P PPP PP SP P + R
Sbjct: 557 NKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRS 616
Query: 690 XPPP 701
PPP
Sbjct: 617 VPPP 620
Score = 31.9 bits (69), Expect = 0.79
Identities = 34/148 (22%), Positives = 35/148 (23%)
Frame = +2
Query: 521 PITXKXPXXXPXLXXXXPXSPXRXXXXPXXXXXXPXXGGXXXXPXPXNPSXXCVSGXPPP 700
P K P P P P P P P S S PPP
Sbjct: 529 PSDRKLPSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPP 588
Query: 701 XNXRXSQXXFXXAXXXXPXXAXXXXTXXTPXXXXPXPPPPXLFXXLPHLXGGXXXXLSPX 880
+ P P P PP P LP P
Sbjct: 589 PPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPN-HSVLPPPPPPPPPPSLPN 647
Query: 881 XKTPPHXPPXXXXXXXFXAPPPXALGPR 964
PP PP F APPP PR
Sbjct: 648 RLVPP--PPAPGIGNKFPAPPPPPPPPR 673
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 32.3 bits (70), Expect = 0.60
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +3
Query: 522 PSXQXPPXXXXPXXXXIPXPLXGXXXSPPPXXSPPXXXGXXXSPTPKTXXXXVXRGXPPP 701
P PP P P P PP PP G P P R PPP
Sbjct: 264 PPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPPP 323
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 31.9 bits (69), Expect = 0.79
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +2
Query: 809 PPPPXLFXXLPHLXGGXXXXLSPXXKTPPHXPPXXXXXXXFXAPPPXALGP 961
PPPP + P G + PPH PP PPP + P
Sbjct: 256 PPPPPMQQFPPMQMNGQPVWPPQNTQLPPHMPPQMHYRPAVRPPPPNMMPP 306
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 788 PXXXXPXPPPPXLFXXLPHLXGGXXXXLSPXXKTPPHXPPXXXXXXXFXAPPPXAL 955
P P PPPP L P+ P PP PP PPP L
Sbjct: 734 PPVTQPLPPPPPLHQHQPYQPRHTDALPLPLPLPPPPPPPFSVQQQQLPPPPPYHL 789
>08_01_0649 +
5607234-5608397,5609358-5609513,5609598-5609796,
5612419-5613608,5614505-5614660,5614742-5615041
Length = 1054
Score = 30.3 bits (65), Expect = 2.4
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = -2
Query: 355 ADNYVINGDMNQLYKESNEAHDAKSDGCCN--GNLLEFFPIRFC--ASSH*SDGVLSELL 188
AD Y NGD Y+ + HD+ + G N GNL FP++ AS+H + +L LL
Sbjct: 338 ADEYSSNGDPGDEYRGNYVNHDSANYGRANKFGNL--NFPVKSIVDASAHEGELLLRRLL 395
Query: 187 ARLDEFCDL 161
F +L
Sbjct: 396 ENFPMFNNL 404
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = +2
Query: 803 PXPPPPXLFXXLPHLXGGXXXXLSPXXKTPPHXPPXXXXXXXFXAPPPXALGP 961
P PP + +P G L+P PP PP F PP P
Sbjct: 30 PPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQP 82
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +2
Query: 803 PXPPPPXLFXXLPHLXGGXXXXLSPXXKTPPHXPPXXXXXXXFXAPPP 946
P PPPP ++ G L P PP PP PPP
Sbjct: 228 PLPPPPPPPPKPANIAGAPGLPLPPPPPPPPGPPPREIVPGQTLLPPP 275
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = +3
Query: 414 VLEHPLTYYIIYNKLYCIIS*XNKLFGSCTKXXXNXPSXQXPPXXXXPXXXXIPXPLXGX 593
+L + +I++++ I+S GS T P+ PP P P PL
Sbjct: 440 LLGDAVNQFILWHRRDIILSAAVLAAGSSTPSSAAAPAPPSPPEPPSPRHPPSPPPLRSP 499
Query: 594 XXSPPPXXSP 623
P P SP
Sbjct: 500 PRQPTPPPSP 509
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = +3
Query: 414 VLEHPLTYYIIYNKLYCIIS*XNKLFGSCTKXXXNXPSXQXPPXXXXPXXXXIPXPLXGX 593
+L + +I++++ I+S GS T P+ PP P P PL
Sbjct: 486 LLGDAVNQFILWHRRDIILSAAVLAAGSSTPSSAAAPAPPSPPEPPSPRHPPSPPPLRSP 545
Query: 594 XXSPPPXXSP 623
P P SP
Sbjct: 546 PRQPTPPPSP 555
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +2
Query: 785 TPXXXXPXPPPPXLFXXLPHLXGGXXXXLSPXXKTPPHXPPXXXXXXXFXAPPPXALGP 961
TP P PPPP P P TPP P PPP A P
Sbjct: 64 TPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPPPPAPAP 122
>09_02_0048 -
3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -2
Query: 271 CNGNLLEFFPIRFCASSH*----SDGVLSELLARLDEFCDLIHY*INNSTI 131
C +L F ++F ++H DGV + LL LDEF LIH NS I
Sbjct: 345 CTDSLPVLFKLKFKFANHDRVFSGDGVGTVLLQILDEFLQLIHIIFCNSDI 395
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/62 (25%), Positives = 23/62 (37%)
Frame = +3
Query: 522 PSXQXPPXXXXPXXXXIPXPLXGXXXSPPPXXSPPXXXGXXXSPTPKTXXXXVXRGXPPP 701
P+ + PP +P P +P P +PP +P+PK PPP
Sbjct: 257 PATKPPPSFPPQLAPTMPPPAHAPAETPAPPTTPPALPPATTAPSPKNS----SSSPPPP 312
Query: 702 KT 707
T
Sbjct: 313 CT 314
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/66 (24%), Positives = 19/66 (28%)
Frame = +3
Query: 522 PSXQXPPXXXXPXXXXIPXPLXGXXXSPPPXXSPPXXXGXXXSPTPKTXXXXVXRGXPPP 701
P PP P + P+ PPP PP + P V PP
Sbjct: 154 PPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPP 213
Query: 702 KTXXYP 719
T P
Sbjct: 214 PTLPPP 219
>06_03_0750 -
24140988-24141037,24141108-24141345,24142158-24142232,
24142345-24142413,24142550-24142581,24143503-24143583,
24143791-24143851,24144135-24144275,24144372-24144563
Length = 312
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = +2
Query: 788 PXXXXPXPPPPXLFXXLPHL---XGGXXXXLSPXXKTPPHXPPXXXXXXXFXAPPPXALG 958
P PPPP F PHL SP +PP PP P P + G
Sbjct: 6 PTAAASAPPPPPAFPADPHLVDRAARFSAFASPSPPSPPPPPPPPPSSSSKRKPDPASKG 65
>04_04_1125 + 31085106-31085714
Length = 202
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +3
Query: 516 NXPSXQXPPXXXXPXXXXIPXPLXGXXXSPPPXXSPPXXXGXXXSPTPKTXXXXVXRGXP 695
N P+ + PP P P P +PP +PP +PTP T P
Sbjct: 33 NCPTTKPPPPPCQPPP---PTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATP--PP 87
Query: 696 PPKTXXYP 719
P T P
Sbjct: 88 TPATPATP 95
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 537 PPXXXXPXXXXIPXPLXGXXXSPPPXXSPPXXXGXXXSPTPKTXXXXVXRGXPPP 701
PP P P P PPP PP G P P PPP
Sbjct: 1158 PPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPP 1212
Score = 28.3 bits (60), Expect = 9.7
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 5/63 (7%)
Frame = +2
Query: 788 PXXXXPXPPPPXLFXXLPHLXGGXXXXL-----SPXXKTPPHXPPXXXXXXXFXAPPPXA 952
P PPPP L P L SP TPP PP PPP
Sbjct: 1130 PPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLP 1189
Query: 953 LGP 961
GP
Sbjct: 1190 SGP 1192
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/41 (29%), Positives = 15/41 (36%)
Frame = +3
Query: 537 PPXXXXPXXXXIPXPLXGXXXSPPPXXSPPXXXGXXXSPTP 659
PP P P P P P +PP G +P+P
Sbjct: 38 PPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGPAAAPSP 78
>06_01_0763 + 5712466-5712721,5714302-5715743
Length = 565
Score = 28.3 bits (60), Expect = 9.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 265 HCNSHRILHHGLHWILCKADSY 330
+C+ HR H + W++ + DSY
Sbjct: 280 YCDDHRQFLHRVQWVILRTDSY 301
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +3
Query: 603 PPPXXSPPXXXGXXXSPTPKTXXXXVXRGXPPP 701
PPP PP P P + +G PPP
Sbjct: 355 PPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPP 387
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,930,018
Number of Sequences: 37544
Number of extensions: 366254
Number of successful extensions: 1510
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -