Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_K17
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257...    29   5.1  
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714...    29   5.1  
11_06_0551 + 24903208-24903399,24903513-24904661,24904686-24907502     28   8.9  
10_07_0152 + 13439178-13439517,13440072-13440229,13440431-134404...    28   8.9  

>08_02_1277 +
           25823835-25825113,25825201-25825418,25825501-25825724,
           25826468-25827080,25827735-25827775,25830549-25831191,
           25832595-25834012,25834110-25834251,25834415-25834522,
           25835346-25835558,25835643-25835753,25836099-25836293,
           25836555-25836695,25836835-25836909
          Length = 1806

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 277 LWRYGQDLSVHVSGLPTLRYFYKDRAGHNGNRDEQGDVPASQFDARSAPR 426
           L+ + + L   V     LR  Y+ R  H  N+D +GD P+S    R+A R
Sbjct: 487 LYTWEKKLYKEVKAGERLRIDYEKRLNHLRNQDVKGDEPSSVDKTRAALR 536


>02_05_0942 +
           32970537-32970581,32971059-32971113,32971300-32971417,
           32971567-32971615,32971637-32971723,32971890-32971970,
           32972074-32972181,32972432-32972503,32973218-32973250
          Length = 215

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/52 (23%), Positives = 27/52 (51%)
 Frame = +2

Query: 209 YAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPVTT 364
           + E   P   +Y++K+   +ID    + + ++   A++ PY  +  ++ VTT
Sbjct: 162 FVESSLPVIEYYNAKDKVKKIDAAKPIPEVFEDVKAIFAPYAPNALLSGVTT 213


>11_06_0551 + 24903208-24903399,24903513-24904661,24904686-24907502
          Length = 1385

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 308 TSAVYPPYGTSIKIAPVTTETEMNKETCLQVNSTQDQLQDIQ 433
           T+A  P  GTS  +A  TT T  +K+   ++     +LQD+Q
Sbjct: 412 TTAPSPGVGTSHDVATATTTTTFDKDQIEEMIYIHMELQDMQ 453


>10_07_0152 +
           13439178-13439517,13440072-13440229,13440431-13440477,
           13441115-13441178,13441600-13442237,13442328-13442562
          Length = 493

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 146 DKGSPPQWSPVYTVKGLLNIPYAELHEP 229
           D GS  +W P+    G +N P   LH P
Sbjct: 391 DSGSTSEWRPLIKKYGYVNCPTVRLHIP 418


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,557,749
Number of Sequences: 37544
Number of extensions: 344327
Number of successful extensions: 709
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)