Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_K17
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    32   0.65 
Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical pr...    29   3.5  

>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
 Frame = +2

Query: 203 IPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPP-YGTSIKIAPVTTETEMN 379
           IP+ ++ +         ++K  ++ +G  V+ YQ T  + PP Y +S    P     E+ 
Sbjct: 456 IPFGQVEQQPIPMNPFGSAKPTVNKFGMKVEPYQTTDYMLPPGYPSSSIYLPQPAYPEVK 515

Query: 380 KETCLQVNSTQDQLQDIQSVLPDMTDXNXSA 472
             + + ++STQ Q       +P       SA
Sbjct: 516 PNSSVILSSTQSQNNTSPQTIPASASVTNSA 546


>Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical
           protein C29F3.1 protein.
          Length = 755

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 353 PVTTETEMNKETCLQVNSTQDQLQDIQSV 439
           P TTE  +NK    ++N T D+LQ  QSV
Sbjct: 49  PNTTENVLNKALFAEMNETLDRLQSDQSV 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,827,712
Number of Sequences: 27780
Number of extensions: 307312
Number of successful extensions: 650
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)