Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_K16
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 58 1e-08
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 56 5e-08
05_01_0564 - 4919294-4919391,4919491-4919620,4919700-4919789,491... 36 0.057
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 36 0.057
01_01_0608 - 4513604-4513701,4513790-4513919,4514027-4514116,451... 36 0.057
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 31 1.2
02_03_0352 + 18050004-18050079,18050321-18050499,18050695-18050724 30 2.1
02_04_0366 - 22389591-22390527,22391296-22391429,22391762-223918... 30 2.8
01_06_1683 - 39134826-39135664,39136202-39136278,39136391-391364... 30 2.8
04_04_0155 - 23153314-23154204,23156887-23157104,23157284-231573... 29 5.0
03_02_1025 + 13289146-13289586,13291882-13292087,13292174-132923... 29 5.0
10_08_0847 + 21006842-21007042,21007173-21007261,21012226-210124... 28 8.7
01_06_0677 - 31104736-31104897,31105046-31105234,31105313-311054... 28 8.7
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +1
Query: 739 GKSCCKIXPEASGYLHIGHAKAALLNQYYQQAFHGKLVM 855
G+ C + PE SGYLHIGHAKAALLN+Y+ + + G+L++
Sbjct: 204 GEVCVRFAPEPSGYLHIGHAKAALLNKYFAERYQGRLIV 242
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 55.6 bits (128), Expect = 5e-08
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +1
Query: 739 GKSCCKIXPEASGYLHIGHAKAALLNQYYQQAFHGKLVM 855
G+ C + PE SGYLHIGHAKA LLN+Y+ + + G+L++
Sbjct: 206 GEVCVRFAPEPSGYLHIGHAKAGLLNKYFAERYKGRLIV 244
Score = 38.7 bits (86), Expect = 0.006
Identities = 31/142 (21%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Frame = +2
Query: 347 LEKVTMNHWLSFSLIL--EDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLY-VSS 517
++ ++ WL ++ ++ E + +LD L T+LV LS++D V+S L
Sbjct: 74 IQAAYVDQWLDYAPVILSGSEFEAACSFLDGYLASRTFLVSYGLSIADIVVWSNLAGTGQ 133
Query: 518 KFKEISKLIPSQNIRRWM-KLVEAQPQVQTVIKA-LPSDALDKLTKVSSRKSPPTNAESG 691
+++ + + QN+ RW + + + V+ A + + K S ++ P + ++
Sbjct: 134 RWESLRRSKKYQNLVRWFNSIADYSDTLDEVVSAYVGKRGIGKSPAPSLKEKLPDSKQNI 193
Query: 692 GRXQEGKFIELPYAEMGKVVVR 757
+ ++LP A++G+V VR
Sbjct: 194 SIPE----VDLPGAKVGEVCVR 211
>05_01_0564 -
4919294-4919391,4919491-4919620,4919700-4919789,
4919882-4919987,4920087-4920187,4920347-4920442,
4920549-4920648,4920761-4920897,4920980-4921111,
4921222-4921320,4921397-4921594,4921715-4921892,
4922020-4922075,4922168-4922320,4922422-4922514,
4922605-4922706,4922817-4922878,4922995-4923090,
4923354-4923453,4923546-4923617,4923728-4923775,
4923853-4923996
Length = 796
Score = 35.5 bits (78), Expect = 0.057
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 739 GKSCCKIXPEASGYLHIGHAKAALLN 816
GK + PE +GYLHIGHAKA ++
Sbjct: 270 GKVMTRFPPEPNGYLHIGHAKAMFID 295
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 35.5 bits (78), Expect = 0.057
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Frame = +2
Query: 404 IPKSVEYLDKTLGPLT-------YLVGETLSVSDFAVFSVL--YVSSKFKEISKLIPSQN 556
+ +SV L+K LG YL G+ +S++D + FS + ++++++ + P +
Sbjct: 135 VDESVRKLEKVLGVYEARLSGSRYLAGDRISLADLSHFSNMRYFMATEYAGVVDAYP--H 192
Query: 557 IRRWMKLVEAQPQVQTVIKALPSD 628
++ W + + A+P VQ V+ +P D
Sbjct: 193 VKAWWEALLARPTVQKVMAGMPPD 216
>01_01_0608 -
4513604-4513701,4513790-4513919,4514027-4514116,
4514225-4514330,4514442-4514542,4514678-4514773,
4514860-4514959,4515133-4515269,4515563-4515661,
4515740-4515937,4516058-4516235,4516635-4516690,
4516781-4516933,4517248-4517340,4517422-4517523,
4517609-4517650,4517812-4517855,4518087-4518186,
4518323-4518394,4518499-4518621,4519309-4519452
Length = 753
Score = 35.5 bits (78), Expect = 0.057
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 739 GKSCCKIXPEASGYLHIGHAKAALLN 816
GK + PE +GYLHIGHAKA ++
Sbjct: 271 GKVMTRFPPEPNGYLHIGHAKAMFID 296
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +2
Query: 398 DEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKLIPSQNIRRWMKL 577
+++ K +E + L TYL G LS D + F + S L +++ W
Sbjct: 141 EKLKKVLEVYEARLSQNTYLAGNFLSFVDLSHFPFTFYFMATPYASLLDKYPHVKAWWDG 200
Query: 578 VEAQPQVQTVIKAL 619
+ A+P ++ V A+
Sbjct: 201 LAARPSIKKVTAAM 214
>02_03_0352 + 18050004-18050079,18050321-18050499,18050695-18050724
Length = 94
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 635 DKLTKVSSRKSPPTNAESGGRXQEGK 712
DKLT SS K P ++ SGGR QE K
Sbjct: 57 DKLTPNSSVKQQPPSSPSGGRRQEHK 82
>02_04_0366 -
22389591-22390527,22391296-22391429,22391762-22391816,
22392364-22393225,22393342-22393459,22393647-22393737,
22394627-22394670
Length = 746
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 341 SPLEKVTMNHWLSFSLILEDEIPKSVEYLDKTLGPLTYLVGE 466
+P++K WL LIL E+ + V + ++ +TYLVG+
Sbjct: 67 NPVDKSKTGGWLGAGLILGTELAERVCVMGISMNLVTYLVGD 108
>01_06_1683 -
39134826-39135664,39136202-39136278,39136391-39136441,
39136581-39136654,39136782-39136870,39137152-39137234,
39138067-39138241,39138348-39138501
Length = 513
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 359 TMNHWLSFSLILEDEIPKS 415
TMN+WL+FSL +D++P S
Sbjct: 3 TMNNWLAFSLSPQDQLPPS 21
>04_04_0155 -
23153314-23154204,23156887-23157104,23157284-23157392,
23157507-23157509
Length = 406
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 341 SPLEKVTMNHWLSFSLILEDEIPKSVEYLDKTLGPLTYLVGE 466
+P++K WL LIL E+ + V + ++ +TYLVG+
Sbjct: 20 NPVDKDRTGGWLGAGLILGTELAERVCVVGISMNLVTYLVGD 61
>03_02_1025 +
13289146-13289586,13291882-13292087,13292174-13292323,
13292412-13292545,13292843-13292949,13293031-13293137,
13293581-13293686,13294098-13294217,13294318-13294474,
13295163-13295254,13295338-13295582,13295668-13296268,
13296362-13296457,13296541-13296794,13297622-13297715,
13299138-13299188
Length = 986
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 362 MNHWLSFSLILEDEIPKSVEYLDKTLGPLTYLVGETLSVSDF 487
+N WLSF+ I++D Y D T G L+Y TL V DF
Sbjct: 730 INDWLSFNKIIDDHF----RYTDPTSGYLSY----TLYVEDF 763
>10_08_0847 +
21006842-21007042,21007173-21007261,21012226-21012429,
21016334-21016568,21016760-21016952,21017472-21017503,
21019172-21019236,21020766-21020985,21021172-21021370,
21021728-21021768,21023366-21023404,21023699-21023734,
21023767-21023798,21024264-21024426,21024602-21024653,
21024699-21024794,21024911-21025023,21026536-21026615,
21027343-21027577,21027765-21027890,21027994-21028092
Length = 849
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 493 LQCSLCIK*IQRNFKIDSFSKHKTLDEIGRSSTASPNSYKGS 618
L ++C + +R+ DS S HK D+ G +T + + + GS
Sbjct: 58 LAFAICARFQERSITFDSSSYHKLGDDSGAFTTKNDDDFSGS 99
>01_06_0677 -
31104736-31104897,31105046-31105234,31105313-31105470,
31105558-31105648,31105787-31105961,31106065-31106204,
31106293-31106511,31106589-31106718,31107163-31107229,
31107347-31107441,31107535-31107606,31107681-31107736,
31107995-31108060,31108151-31108264,31108787-31109092
Length = 679
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +2
Query: 581 EAQPQVQTVIKALPSDALDKLTKVSSRKSPPTNAESGGRXQEGKFIELPYAEMGK 745
EAQ A P+ + + + RK P E+ +EG+ E+ A++G+
Sbjct: 13 EAQENPAAAAAAAPAPPPARRRRAARRKEPEVAVEAAPEAEEGREEEIEVADLGR 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,177,783
Number of Sequences: 37544
Number of extensions: 413713
Number of successful extensions: 1054
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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