Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_K16
         (890 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr...    69   6e-12
Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z95559-3|CAB08998.1|  786|Caenorhabditis elegans Hypothetical pr...    37   0.022
AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione s...    30   2.6  
AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine re...    29   4.5  
AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical ...    29   4.5  
AF036706-6|AAK39275.2|  481|Caenorhabditis elegans Glutamyl(e)/g...    29   5.9  
AF077536-1|AAK31411.2|  643|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
           protein ZC434.5 protein.
          Length = 1149

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +1

Query: 739 GKSCCKIXPEASGYLHIGHAKAALLNQYYQQAFHGKLVM 855
           GK   +  PEASGYLHIGHAKAALLNQYYQQAF G+L+M
Sbjct: 192 GKVVVRFPPEASGYLHIGHAKAALLNQYYQQAFEGQLIM 230



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
 Frame = +2

Query: 449 TYLVGETLSVSDFAVFSVLYVSSKFKEISKLIPSQNIRRWMKLVEAQPQVQTVIKALPSD 628
           T ++  +L+V+DFA+FSV + + + K            ++  +++   +  T+  A    
Sbjct: 109 TKILDNSLTVADFAIFSVAHNNPQLKA-----------KFSGIIDKVLKEPTLAAAHNFV 157

Query: 629 ALDKLTKVSSRKSPPTNAESGG--RXQEGKFIELPYAEMGKVVVRXHLKLQDIFILAMQK 802
            L K     S  +P   A +G   +  EGKF+ELP AE GKVVVR   +      +   K
Sbjct: 158 GLYK-----SAAAPTATASTGKEKKKDEGKFVELPGAEKGKVVVRFPPEASGYLHIGHAK 212

Query: 803 QLFLINITSKPFMANWS*XFDD 868
              L     + F       FDD
Sbjct: 213 AALLNQYYQQAFEGQLIMRFDD 234


>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = +2

Query: 395 EDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKLIPS-QNIRRWM 571
           ++E+   ++ LD+ L   TYLVGE LS++D +V   L  + ++   +    S  N+ RW 
Sbjct: 85  KNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWF 144

Query: 572 KLVEAQPQVQTVI 610
           + V  QP V+ V+
Sbjct: 145 RTVVNQPAVKEVL 157


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = +2

Query: 395 EDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKLIPS-QNIRRWM 571
           ++E+   ++ LD+ L   TYLVGE LS++D +V   L  + ++   +    S  N+ RW 
Sbjct: 110 KNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWF 169

Query: 572 KLVEAQPQVQTVI 610
           + V  QP V+ V+
Sbjct: 170 RTVVNQPAVKEVL 182


>Z95559-3|CAB08998.1|  786|Caenorhabditis elegans Hypothetical
           protein Y41E3.4 protein.
          Length = 786

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = +1

Query: 739 GKSCCKIXPEASGYLHIGHAKAALLNQYYQQAFHG 843
           GK   +  PE +G LHIGHAKA  +N  Y +A  G
Sbjct: 268 GKVVTRFPPEPNGVLHIGHAKAININFGYAKAMGG 302


>AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione
           s-transferase protein34 protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 452 YLVGETLSVSDFAVFSVLYVSSKFKEISKLIPSQ-NIRRWMKLVEAQPQVQTVIKALP 622
           YLVG+ L+ +D  V   LY  +  KE+    P   N++++ + +   P+++  I+  P
Sbjct: 157 YLVGDGLTWADLVVADHLYSLTNIKELDPEDPIHLNLKKYQERIFNLPELKDYIETRP 214


>AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein100 protein.
          Length = 361

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
 Frame = +2

Query: 128 KYSMMRVSCNRSNPPLGGLMAVEFYRSSAKEIDIVWENESVIILPNSTKPVPFGTSNDLI 307
           K S+ R  CN S P +G LMAV  +  SA  + + ++   V+I  N + P+P   +    
Sbjct: 130 KLSISRF-CNWSKPRVGWLMAVILFFLSAL-LSVFYQFRFVVI-ENRSFPLPQVCAQYQN 186

Query: 308 RILENAFNKSVSPL----EKVTMNHWLSFSLILEDEIP 409
                 F+ ++SPL    +++ +  +L F +I+   +P
Sbjct: 187 TNNVPKFSVALSPLFSNNDRIVLRAYLLFDIIVSKFLP 224


>AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical
           protein B0524.4 protein.
          Length = 772

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 39/192 (20%), Positives = 83/192 (43%), Gaps = 4/192 (2%)
 Frame = +2

Query: 272 KPVPFGTSNDLIRILENAFNKSVS--PLEKVTMNHWLSFSLILEDEIPKSVEYLDKTLGP 445
           K V   T++  ++ L++   + V+   +EK+ + H  S   +    +PK  EY+ K    
Sbjct: 226 KDVEKYTTDASLKTLDSVLPELVAFQKIEKIVLVHSTSHGTVDPSLVPKLDEYVSKIQSV 285

Query: 446 LTYLVGETLSVSDFAVFSVLYVSSKFKEISKLIPS--QNIRRWMKLVEAQPQVQTVIKAL 619
            T +   TL+  +  VF+ L      K +S+   +  + I+    + E   +V   I + 
Sbjct: 286 GTSVNTSTLNALNQIVFADLKDDWVKKVVSRQADALLKAIKPLRNVTEEFKKVSVAIGSA 345

Query: 620 PSDALDKLTKVSSRKSPPTNAESGGRXQEGKFIELPYAEMGKVVVRXHLKLQDIFILAMQ 799
            SD  +++  + ++        +  +   G   +L  + +G+VV     KL    ++ M 
Sbjct: 346 SSDGYNEIVHIGTKFEKAIGMATMIQPLVGMSSQL--SALGRVVT-MSAKLGTAKVVEML 402

Query: 800 KQLFLINITSKP 835
            ++  I I ++P
Sbjct: 403 GRMLAIVILNRP 414


>AF036706-6|AAK39275.2|  481|Caenorhabditis elegans
           Glutamyl(e)/glutaminyl(q) trnasynthetase protein 3
           protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 754 KIXPEASGYLHIGHAKAALLNQYYQQAFHGKLVMXI 861
           +  P  +G+LHIG  + A  N  + + + G  ++ I
Sbjct: 14  RFAPSPTGHLHIGGLRTAFFNYLFAKKYGGDFILRI 49


>AF077536-1|AAK31411.2|  643|Caenorhabditis elegans Hypothetical
           protein C16A11.5 protein.
          Length = 643

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +1

Query: 475 CIRLCGLQCSLCIK*IQRNFKIDSFSKHKTLDEIGRSSTASP 600
           C RL GL C LCIK      K++     +  D    SST SP
Sbjct: 398 CHRLVGLHCDLCIK-----EKVEKSENQEAWDLDESSSTKSP 434


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,834,231
Number of Sequences: 27780
Number of extensions: 385132
Number of successful extensions: 1007
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)